Lagopus muta (rock ptarmigan): 125699327
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Entry
125699327 CDS
T09141
Name
(RefSeq) B-cadherin
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04514
Cell adhesion molecule (CAM) interaction
lmut04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125699327
04519 Cadherin signaling
125699327
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125699327
Cell adhesion molecules [BR:
lmut04515
]
Cadherins
Major cadherins
125699327
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Ig_CLSTN
Cadherin_FAT4_N
Motif
Other DBs
NCBI-GeneID:
125699327
NCBI-ProteinID:
XP_048814728
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All DBs
Position
12:complement(1076157..1081802)
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AA seq
823 aa
AA seq
DB search
MCGSRSGLCPLLLLLLLLAAAPARPCSPPGPRRGSLPSPATLGRGAVLDDIEEPHVGALP
VAPRDASSPRVPTRSRRSLQEVPDVPHAHTALRRQKRDWVIPPIKVPENERGPFPKNLVQ
IKSNRDREAKIFYSITGQGADAPPEGIFTIEKETGWMKVTQPLDREHIDKYHLYSHAVSE
NGKPVEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPEGALPGTSVMQVNATDADDDVETYN
GVIAYSILSQEPREPHPHMFTVNRATGTLSVIASGLDRERVREYTLTMQAADLDGQGLTT
TALAVIEITDVNDNAPEFEPKTYEAAVPENEAELEVARLATTDLDEPQTAAWRAVYSIVR
GNEGSAFTITTDPASNEGVLRTAKGLDYEAKRQFVLHVAVVNEAPFAIKLPTATATVTVN
VEDVNEAPAFDPPLRLAQVPEDVPLGQPLASYTAQDPDRAQQQRIKYVMGSDPAGWLAVH
PENGIITAREQLDRESPFTKNSTYMAVLLAVDDGLPPATGTGTLLLTLLDVNDHGPEPEP
RDIVICNRSPVPQVLTITDRDLPPNTGPFRAELSHGSGDSWAVEVGSGGDTVALWLTEPL
EQNLYSVYLRLFDRQGKDQVTVIRAQVCDCQGRVESCAQKPRVDTGVPIVLAVLGAVLAL
LLVLLLLLLLVRRRKVVKEPLLLPEDDTRDNIFYYGEEGGGEEDQDYDLSQLHRGLDARP
EVIRNDVAPPLMAAPQYRPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGGGS
EATSLSSLNSSASDQDQDYDYLNEWGNRFKKLAELYGGGEDDE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgggtcgcgctccgggctctgcccgctcctcctcctgctgctgctgctcgccgcc
gccccggctcggccgtgctcccccccggggccgcgccgcggatcgctcccgtctcccgcg
accttaggacgcggcgcggtgctggatgacatcgaggagccccacgtcggggcgctgccc
gtggctccccgggatgccagcagcccgcgggtccccacgcggagcaggcgctccctgcag
gaggtccctgatgtccctcacgctcacaccgctctgaggaggcagaagagggattgggtg
atccctcccatcaaagttcctgagaatgagaggggtcccttccctaaaaacttggttcag
atcaaatccaaccgggaccgggaggcaaagattttctacagcatcactgggcagggagcg
gatgctcctcccgagggcatcttcaccattgagaaggagacaggctggatgaaggtgacg
cagccgctggaccgggagcacatcgacaagtaccatctctactcccatgccgtgtctgag
aatggcaaacccgtggaggagccaatggagatcatagtgacggtgacggaccaaaatgac
aacaagccccagttcacacaggaggtgttccgaggctccgtgcccgaaggcgcgctgcca
ggcacttcagtgatgcaggtgaacgccacggatgctgacgatgatgtggagacctacaac
ggtgttatcgcctactccatcctcagccaggagccgcgagagccccatccccacatgttc
accgtcaaccgcgccaccggcaccctcagcgtcatcgccagcggcctcgaccgggagcgc
gtgcgggaatacacgctgaccatgcaggcggccgacctggatgggcaggggctgaccacg
acggcactggctgtgattgagatcacggatgtcaatgacaacgcccctgagtttgagccc
aaaacgtatgaggcggctgtgccagagaatgaggccgagctggaggtggcccggttggcc
accacggacctggatgagccacagacagcagcgtggcgtgcagtctactccatcgtgcgt
ggcaatgagggcagtgccttcaccatcaccactgaccctgccagcaatgagggtgtcctg
cgcacggccaagggtctggactacgaggccaagcggcagttcgtgctccatgtggccgtg
gtcaatgaagctcccttcgccatcaagctgcccacagccacggccacagtgacggtcaat
gtggaggatgtgaacgaggcgcccgcctttgacccgccgctgcggctggcccaggtgccg
gaggatgtgccgctggggcagcccctcgcctcctatacagcccaggatcctgacagagcc
cagcagcagcgcatcaagtacgtgatgggcagtgaccccgcgggctggctggctgtgcac
cctgagaatggcatcatcacagcacgggagcagctggaccgtgagtccccgttcaccaag
aacagcacctacatggccgtgctgctggctgtagatgacggattgccacctgccacaggc
accggcacgctgctcctcaccctgctggatgtcaatgaccacggccctgagcccgagccc
cgtgacatcgtcatctgtaaccgcagccctgtgccccaggtgctgaccatcaccgaccgg
gacctgccccccaacaccgggccattccgtgccgagctgagccatggttctggggacagc
tgggcggtggaggttggcagtggaggtgacaccgttgccttgtggctgacggagcccctg
gagcagaacctgtacagcgtctacctgcggctcttcgatcgccagggcaaggaccaggtc
accgtcatcagggcacaagtgtgcgactgccagggccgggtggagagctgtgcccagaag
ccacgggtggataccggtgtgcccatcgtgctcgctgtgctgggtgccgtgctggctctg
ctgctcgtgttactgctgctgcttctcctggtgaggaggaggaaggtggtgaaggagccg
ctgctgctacctgaggatgacacgagggacaacatcttctactacggggaggaaggtggg
ggtgaggaggaccaggactacgacctgagccagctgcaccgcggcctggacgcccgtccc
gaggtgatccgcaatgatgtggcccccccgctgatggccgccccccagtaccggccccgg
cccgccaaccccgatgagatcggaaacttcatcgacgagaacctgaaggcggccgacacg
gaccccacggcccccccctacgactcgctgctggtgttcgactacgagggtggtggctcg
gaggccacctcgctcagctccctcaactcctctgcctccgaccaggaccaggactacgac
tacctcaacgagtggggcaaccgcttcaagaagctggcggagctctatggcggcggggag
gacgacgaatag
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