Lagopus muta (rock ptarmigan): 125699418
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Entry
125699418 CDS
T09141
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125699418 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lmut01007
]
125699418 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmut03016
]
125699418 (KARS1)
Enzymes [BR:
lmut01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
125699418 (KARS1)
Amino acid related enzymes [BR:
lmut01007
]
Aminoacyl-tRNA synthetase
Class II (A)
125699418 (KARS1)
Transfer RNA biogenesis [BR:
lmut03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125699418 (KARS1)
Prokaryotic type
Other AARSs
125699418 (KARS1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
125699418
NCBI-ProteinID:
XP_048814895
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All DBs
Position
12:complement(75044..86837)
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AA seq
600 aa
AA seq
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MLSPPAVRLFGWAWRAAPALRWCRVPHSRSSELKRRLKAERKIAEKEAKQKEQSEKHPNK
PFLAADSENNIGADEESLDPNQYYKIRSHAVQQLKGTNEDPYPHKFHVDLSLSDFIGRYS
HLQPGDHLTDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEEEYFRIN
NKLRRGDIIGVVGNPGKTKKGELSIIPYEVTLLSPCLHMLPHLHFGLKDKETRYRQRYLD
LILNDYVRQKFITRAKIVTYIRSFLDELGFLEIETPMMNIIPGGAMAKPFITYHNELDMK
LYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEI
TEKLLSGMVKHITGSYKITYHPDGQDGQAYEVDFTPPFRRISMVDELEKTLGVKFPSTES
FETEETRRFFDDLCAVRNVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQIMSPLA
KWHRVQRGLTERFELFVMKKEVCNAYTELNDPFQQRQLFEDQAKAKAAGDDEAMFIDENF
CTALEYGLPPTAGWGMGIDRFTMFLTDSSNIKEVLLFPAMKPEDKKKEGHPEQPAEGTSV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcccccctgctgtgcggctcttcggctgggcctggagggccgcgcccgcgctc
cgttggtgccgggtacctcatagccgaagcagtgaactgaagagacgcctgaaggctgag
agaaaaattgctgaaaaggaggcaaaacaaaaagaacaaagtgaaaagcatccaaataaa
ccttttttggctgctgattcagagaacaacattggtgctgatgaggaaagcttggatcca
aatcaatattataagatccgtagtcatgcagtccagcagctgaagggcaccaatgaagat
ccctacccccacaagttccatgtagacttatctctctcagatttcatagggaggtacagt
cacttgcagccgggagatcatctgacagatatcacagtgagagtggcaggtcgtatccat
gcaaagcgtgcctctggaggaaaactgattttctatgatcttcgtggtgaaggagtcaag
ttgcaggtcatggcgaattccaggctttacaagtctgaggaagaatatttccgtattaac
aacaaactgcgtcgtggggacattattggtgtggtggggaatcctgggaaaacaaagaaa
ggagaactgagtattattccttatgaagtaactcttttatccccatgcctgcacatgttg
cctcatcttcatttcggcctcaaagataaggaaactagatatcgacagagatatttggat
ttaattcttaacgattatgtgaggcagaaatttataacccgtgcgaagattgtgacgtat
attagaagctttctggatgaattgggtttccttgagattgaaactcctatgatgaatata
attccagggggagctatggcaaaaccttttatcacgtaccacaatgagctggatatgaag
ttgtatatgagaatcgctccagagctttaccataagatgttggtggttggaggcctggac
agagtgtatgaaattggacgtcagttccggaatgaaggaattgatttgactcacaaccct
gagttcacaacctgtgaattctacatggcttatgcagactaccatgatttgatggaaatc
acagagaagttgctttcagggatggtgaagcacattactggaagttacaagattacttac
catccagatggtcaagatggacaggcctatgaggtagattttacgcctcccttccggcgc
attagtatggtggatgaactggaaaagactttaggagtgaaatttccatcaactgagtct
tttgaaactgaagaaactcgaaggttctttgatgacctttgtgcagtgagaaatgtggag
tgtccacctcctaggacaacagccaggcttcttgacaaattagttggtgaatttctcgaa
gtcacttgtatcaacccaactttcatctgtgatcatccacagatcatgagtcctctagcc
aaatggcatcgtgttcaacggggactaacagaacgctttgagctctttgtgatgaagaag
gaagtgtgtaatgcatacacagaactgaacgatcctttccagcagcggcagctttttgaa
gaccaggccaaggcaaaagctgcgggtgatgatgaagccatgtttatcgatgaaaacttc
tgcactgcactggagtatggacttccccctacagctggttggggcatgggaatcgatcgc
ttcaccatgttccttaccgattccagtaatatcaaggaggtgctgctgtttccagcgatg
aaaccggaggacaagaagaaggaggggcatcccgagcagcccgccgaaggcacctctgtg
tga
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