Lagopus muta (rock ptarmigan): 125699484
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Entry
125699484 CDS
T09141
Symbol
IRX6
Name
(RefSeq) iroquois-class homeodomain protein IRX-6
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125699484 (IRX6)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125699484 (IRX6)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
TFIIA
Motif
Other DBs
NCBI-GeneID:
125699484
NCBI-ProteinID:
XP_048815009
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Position
12:15902998..15906394
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AA seq
471 aa
AA seq
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MSFSQFGYPYSTTSQGLPRGRSARPVSPPQFLVPGSPGASCCEPAPRSGPDASSAPAAAS
LCCAPYESRLLAPGRAELNAALGMYGAPYAAGQGYGNYLPYSAEPAAIYTALNPQYEIKD
GATTLHSGITQPAAYYSYEHSLGQYQYDRYGPVDFTASARRKNATRETTSTLKTWLYEHR
KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAGEERKEDGTRH
DGEFGAGSDGRERKSCKEDKELRLSDVDDLEEEDEEDEDEEEAGKAAKGRPGSLQEAPGP
GTALPGAPRSACSVPGPCRAFPCPRAPSAAPAALAPPPPYASPEKPRIWSLARTAGANAA
RRGSPEGRGTEEGGGAAGELPPAAEAPFRSSAFSPQPVPRSCASHRGQGQPCQYAAGEGF
GRGGGGGPGGAEPGGTCLERLRTAFRPVLKRAACPFLSAGGGALAAARLSP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcccagttcggatacccctacagcaccacttcgcaggggctgccccgcggc
cgctcagcgcgccccgtctctccgccgcagttcctggtgcccggcagccccggcgcgtcc
tgctgcgagcccgctccccgctccggcccggatgcgtcctcggcgccggccgccgcctcg
ctgtgctgcgccccgtacgagagccggctgctggcgcccggccgcgccgagctcaatgcg
gcgctgggcatgtacggagccccgtacgccgccggccagggctacggcaactacctgccc
tacagcgccgagcccgccgccatctacaccgcgctgaacccccagtatgagatcaaggat
ggcgccaccactctgcactcggggatcacgcagcccgccgcttactactcgtacgagcac
tccctggggcagtaccagtacgacaggtacgggccagtggatttcaccgcttcggcccgg
cgcaagaatgccactcgggagacgacgagcaccctgaagacgtggctgtacgagcaccgc
aagaacccgtaccccaccaagggcgagaagatcatgctggccatcatcaccaagatgacc
ctcacccaggtctccacctggttcgccaacgcgcggcggcggctcaagaaggagaacaag
atgacctggtctcccaagaacaaagcaggggaagagagaaaggaggacggcacacggcac
gacggggagttcggcgcggggagcgacggccgagagcggaagagctgcaaggaggacaag
gagctgcgactcagcgacgtggacgacctggaggaggaggacgaggaggatgaggacgag
gaggaggcagggaaggcggcgaagggccggcccggctctctgcaggaagcccccggcccc
ggcacggctctgcccggggccccgcggagcgcctgcagtgtgcccgggccgtgccgcgcc
ttcccctgcccccgggccccctccgcggcccccgctgccctcgcccctccgccgccctac
gcgtccccggagaagccgcgcatttggtcgctggcccgcacggccggggccaacgcagcg
cgcagaggcagccccgagggtcgcggtacggaggagggcggcggggcggcgggggagctg
cccccggccgcagaggccccgttccggagctccgccttcagtccccaacccgtcccgcgg
agctgcgcgtcccaccgcggccaggggcagccgtgccagtacgcggcgggcgaaggcttc
gggcggggcggcgggggcggcccgggaggcgccgagccgggcgggacgtgcctggagcgg
ctgcggacggccttcaggccggtgctgaagagggccgcctgccccttcctgagcgccggc
ggcggggctctggctgcagccaggctctcgccctga
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