Lagopus muta (rock ptarmigan): 125699546
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Entry
125699546 CDS
T09141
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125699546 (ZC3H12B)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
125699546 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
125699546
NCBI-ProteinID:
XP_048815127
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All DBs
Position
13:60039..82302
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AA seq
835 aa
AA seq
DB search
MTAWSMVGKLKMEKRHTREERNVEQDAGECSAESEEWTSSESEPEQPYFRSSCSNIPWRE
KEASTKPHRPLCRSPCLDRPSFSQSSITQDLKLEECKTNLDKEYQAKMDFALKLGYAGDQ
IQAVLNKLGADALINDVLAELVRLGNKSESEGQNSSTTNTLVPRGPCPKEIASPELSLED
EVVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQ
SRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNY
RDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQPC
PYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSSKG
EISSEVKRIAPKRQSDPSIRSVAVEPEEKLTVARKSEANSVPSLVSALSVPTLPPPKSHA
AGALNTRSASSPVPGSSQFTHQKSSLEHMSSVQYPPILVTNSHGTSVSYTDQYPKYESLG
DHGYYSLLSDFSNLSISSMHNTDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYNDL
YLGVADASPEDNVKIHRLTSQNRLQPFPHGYHEALNRVQSFGTEEPKQSLRKQSVSHLGL
HAQHPVVGARSSCPGEYPVPQNIHPSTAQSSRALVMTRMDSISDSRLYESNPTRQRRPPL
CREQHASWDPLPCATDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGICGE
PREPHVIPEHQYQTYKNLCNIFPPSIVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtagggaaactgaaaatggagaagaggcacaccagagaagag
agaaatgtggaacaagatgctggggaatgcagcgctgaatctgaggaatggacgagctca
gaaagcgaacctgagcaaccgtacttccgaagcagctgtagcaatattccatggagagaa
aaagaggcttccactaaaccacatcggccactctgtcgctccccgtgcttggatcgccca
agtttttcacagagcagtatcacacaagacttgaaactagaggaatgcaaaacaaatttg
gacaaggaataccaagctaaaatggattttgctttaaagcttgggtatgcaggagatcag
atccaggctgtactgaataaactgggagcagatgcgctcatcaatgatgttctggcagaa
cttgtgagacttggtaacaaaagtgaatcagagggacagaacagcagtaccactaatact
ctggtgccaagaggtccttgcccaaaggaaatagcaagccctgaattgtcacttgaagat
gaagttgtggataacagtgataacttgaggccaattgtcattgatggaagcaacgtggct
atgagccatggaaataaagaaggattttcctgtcggggaattcaactagctgttgattgg
tttctggaaaaaggacataaagatatcaccgtgtttgtacctgcatggagaaaagaacag
tctagaccagatgcaccaattacagatcaagaaatcttacggaaattggagaaagaaaaa
attcttgttttcaccccatctcgaagagttcaggggagaagagtagtttgctatgatgat
cgattcatagtaaagcttgcttttgactcagatggcataattgtatcaaatgacaactat
cgagatcttcaaaatgaaaaaccagaatggaagaagttcatagaggagcgtctgttaatg
tattcttttgtgaatgataaatttatgcctcctgatgatcctctaggacgccatggtcca
agccttgaaaacttcttaaggaaaaggccagttattcctgaacataaaaaacaaccgtgt
ccttatggtaaaaagtgcacctatgggcacaaatgtaaatattaccacccagaacgggca
aaccagcctcaaaggtcagtagcggatgagcttcgaataagtgccaaattatctgctgtg
aaaacaatgagtgagggagccttggctaagtgtggcacagggccctccagctccaaagga
gagatcagttctgaagtgaaacgcattgccccaaagcgtcagtcagatccaagcattaga
tcagtagctgtggagcctgaggaaaagttaacagtagcccggaagtccgaggccaactct
gtcccatctctggtttctgcattaagtgtaccaacgctccctccaccaaaaagccatgca
gctggtgcattaaatactcgatctgcaagcagtccagtgccaggttcctcacagttcacg
catcagaaatcctcactggaacacatgtccagtgtgcaatatcctccaatattagtcacc
aacagccatggcacctcagttagttacactgaccagtatcccaaatatgaatcgttaggg
gaccatggctattattccttactcagtgatttctccaacttgagcataagtagtatgcat
aacacagattattacggggctgatatggaccaggggatgtattctagaaactcaagcccc
tgtcctgacaattgcttaagccatacaagtaatgattcttattcctcttacaatgacttg
tatctgggtgtagcagatgccagtccagaagataatgtgaagatccacagactgacatcg
caaaatcgtcttcagccttttccccatggttaccatgaagccttaaatagagttcagagt
tttggaactgaagagcctaaacaatcccttcgcaaacagtctgtttcccacttaggcctg
catgcccagcatccagttgttggagcacggtccagttgtccaggagaataccctgtgcct
caaaatattcatccatcaactgcacagtcaagccgtgccttggtcatgacaagaatggac
agtatttctgactcacggctttatgaaagtaatcctacaaggcagaggagaccacctctg
tgtcgagagcagcatgctagttgggatccgttaccgtgtgcaacagactcttatacttat
cattcatatccattgagtaacaacctcatgcagccatgttatgaacctgtaatggtaaga
agcatgccggagaagatggagcagctgtggaggaatccatggattgggatatgtggtgag
ccacgggagccacatgttatcccagagcatcagtatcaaacatacaagaatctctgcaat
attttcccgccaagcattgtcctttctgtgatggaaaagaatccccacatgacagatgca
caacagctggcagctatgattgttgccaaattaagaacagggcgttga
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