Lagopus muta (rock ptarmigan): 125699561
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Entry
125699561 CDS
T09141
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125699561 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125699561 (ATRX)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125699561 (ATRX)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
125699561 (ATRX)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125699561 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
125699561
NCBI-ProteinID:
XP_048815158
LinkDB
All DBs
Position
13:complement(12621802..12697713)
Genome browser
AA seq
2421 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEDTNSPPALSKTKSLGKSREPERSPTSMENS
REEGGSSSERVTLLGSSRSKRKPTVVTKYVGSDEEQILDETVNEDNSNENSENDVDMKSL
PKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEVPKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTILDENNQWHCYSCHPEPLLDLVTACDSVFENLEQLLQQNKKKTK
VESEKSKIYDSTVKFSPKRNNSNCNGEEKNLDDSYSGSLTYSYKALMVPKDMLKKTKKLV
ETTANMNSSFVSFLKKAAENSEVSPAVQLRQLKAFRSVLGDIKKAHVALEEGLNLEIQAL
DVKIKEKNTKEKKTDVRSEKNEVKKDEGKEHVALKGDDTVKKQKKVVSEQPDNEPMDQDV
STVEKKDSKRTSGEDKRSGTNEEPQYEPNSTEALDMDIVSVPSSVPEDIFETLESAMEIQ
TAADEQGNGNSGTDHENPNTKLTTPLKDTKGSKLKTSAKGTKELIVKLTPVSLSESPFKS
EDQDSSLEKGSKDERTEKCDSVKQNSNADSERSTENEAVSLAEESDLRRSPRVKTTPLRR
QTDVNPLTSNSEEDSNDTSNEKRKRRSSKQSRRKKDKRNSSDSAVDGPRPNKLCKSKKPA
IVDNSSDSDEMPAVLKEVAMMSRSSSDIDSNSELPAKDQKTSSVLKDQPVMDENGKRKRK
SSSSGSDLDAKRGKSAKNSATAKKKRQNYSDSSNYDSELEKEIKHLSKIESAKKAKKKYS
RKEDSYDSSEEEQRKKVSKKKVSPKKQRGKSSEDDAAEKSSPEKEINHSSEDKKVSVGSV
AKEKLKKNLKEEAVKGKLDESSDAEKSLLEKEESSPKSIKLTEAKKNKDFKKKKAQEDSS
SESTEQCAKKEHSFDSSKEKFKNKKRSENKEKKSENLKQKILKKEQEDSSSDVEKSSPEK
GSCNSSENDKTKNETVVKERKRRNVREKVPKRAQVDLSSDADKSPLKEESSSEDAVQSKR
RPEVKEKKKISQKKKITKKEQNESSSSDEESYEDNKKKIKKGSVKENKRSSLTEKKKIPK
KVIVSSSSSSDKEENEEQNSTGDGSSDEQKIMPVTENLMLSAGTGFCQSSGDEGEAKSRT
VPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDASSDEESDEGKKKTGKQTENTGDD
EENEKEDNSESNSEEEDSKKPRYRHRLLRHRLTVSDGESGEEKKGKPKETKEGKRRNRRK
VSSDDSNGSEFHESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIKVPDD
SSSENNNKSNSEDEENDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAERE
REREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGVQFM
WDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLNFRTALVVCPLNTA
LNWLNEFEKWQEGLEDDEKLEVCELATVKRPQERSYMLQRWQDEGGVMIIGYEMYRNLAQ
GRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPL
QNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEML
AGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGGGNEGGRGKAGAK
LFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDDFIASDSDETSMSLSSDDYAKKK
KSKGKKGKKECSSSGSGSDNDVEVIKVWNSRSRGGGEGNAEELGNNPSAVIKSEEGKATS
SSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLI
EDFLELANREKTDKEKPPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGR
LFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQSKPVFVYRFLAQGTM
EDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPML
PKDTILAELLQINKEYIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNM
PTGTNMLPTNFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAARIQPLE
DIISTIWKENVTLTESQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMN
RRLQQQYNQQQQQHMSYQQTAMSHLMMPKPPNLIMNPSNYQQIDMRGMYQSVSGGMQPPP
LQRAPPPMRGKNAGPSQGKSM
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagagcccatgagtgaaagcaagttgaatacattggtgcagaaactccatgac
ttcttggctcactcatcagaggaatctgaggacacaaactctcctccagcactatctaaa
accaaaagcctaggtaaaagtagagaacctgaaagaagtccaacctcaatggagaacagt
cgagaagagggtggtagttcttcagaaagagtcacgttgttgggatcatcacgctcaaaa
aggaaacctacagttgtaacaaagtatgttggatcagatgaggaacaaatcttagatgag
actgtaaatgaagataattcaaatgaaaactcagaaaatgatgttgatatgaaaagcttg
cctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaagtccccaaaaag
cgtggagaggaaggactgcatggaattgtaagctgtacagcttgtgggcaacaggtgaac
cattttcaaaaggattcaatctatagacatcctacattgaaagttcttatttgtaagaca
tgctacaagtattacatgagcgatgacattagccgtgattcagatggaatggatgaacag
tgtaggtggtgtgctgaaggtggaaatctgatttgctgtgacttttgccataacgccttc
tgtaaaaagtgcattttgcgcaacttgggtagaaaggagctatcaaccatactggatgaa
aataaccagtggcattgctatagctgtcatccagagcctctattggacttggtgactgcg
tgtgacagcgtgtttgaaaatttagaacagttactgcaacaaaacaaaaaaaagaccaaa
gttgaaagtgaaaaaagtaaaatatacgacagtacagtcaaattttctccaaagagaaat
aattcaaactgtaatggtgaagaaaaaaacctagatgattcgtattcgggttcactaaca
tattcttataaagcactaatggtgccaaaagacatgcttaagaaaacaaaaaaactggtt
gagactacggcaaatatgaattccagttttgtgagctttttgaaaaaggctgcagaaaat
tcagaagtaagcccagctgtgcagcttcgtcagctaaaagcttttagatctgtgctgggt
gacatcaaaaaagctcatgtggcactagaagaaggtctgaacctggagattcaagctttg
gatgttaaaatcaaagagaaaaataccaaagagaaaaaaactgatgttagatcagaaaaa
aatgaggtgaagaaagatgaaggaaaggaacatgtggcattaaaaggggatgacactgtt
aagaagcagaaaaaagttgtatcagaacagcctgacaatgagccaatggatcaagatgtt
tcgacagtagaaaaaaaagacagcaaacgtacaagtggtgaagataaaaggtctggcaca
aatgaggaacctcagtatgagcctaatagtacagaggctttagacatggatatagtgtct
gttccctcatctgttcctgaagatatttttgagactctagaatctgctatggaaattcag
actgcagcagatgagcaagggaatggaaatagcggaacagatcatgagaatccaaataca
aaattaaccactcctttgaaagataccaaaggatctaaactgaaaacatcagctaaagga
accaaggaattgattgtgaaattgactcctgtatccctttcagagtctccatttaaatct
gaagatcaagacagcagtctggaaaagggaagcaaggatgaaagaacagaaaaatgtgat
tctgtaaagcaaaatagtaatgctgatagcgaacgttccacagagaatgaagcagtctca
cttgcagaggaatccgatctcaggagatcaccccgtgtgaagaccacacctctgaggcgc
caaacagacgttaatcctttaacatcaaattcagaagaagatagcaatgacacaagcaat
gaaaaacgtaagagaagatcatcaaaacagtcaagaaggaaaaaagataaaagaaactct
tctgacagtgcagttgatggccctaggcctaataaactttgtaaatcaaaaaagccagct
atagtagataatagttctgattctgatgagatgccagctgttcttaaagaagtagctatg
atgagtcgcagttcttcagatatcgacagcaatagcgaattaccagcgaaagatcagaag
acttcaagtgttctgaaggatcaaccagtaatggacgaaaatggaaagcggaaaagaaaa
agttccagttctggttcagatttagatgccaaaaggggcaagtcagctaaaaattctgct
accgcaaaaaagaagcggcagaactattcagattcttcgaactatgattctgagttagaa
aaagaaattaagcatttgagtaaaattgagtctgcaaaaaaagctaagaaaaaatactca
cggaaagaagatagttacgattcttcagaagaagagcagaggaagaaagtcagtaagaaa
aaggtctctccaaagaaacaaagaggtaaatcttctgaagatgatgctgctgaaaagtca
tctccagagaaggagattaatcattcatctgaagataaaaaagttagcgtggggtcagtt
gctaaagaaaaactaaagaaaaacttaaaagaagaagctgtgaagggtaagcttgatgag
tcttctgatgctgagaagtctttactggagaaagaagagagtagtcctaaaagtattaag
ctaactgaagctaagaaaaacaaggattttaagaagaaaaaggctcaggaagattcttct
tcagagagtactgagcaatgtgcaaagaaggaacacagttttgattcttcaaaagagaaa
ttcaaaaacaaaaagagatcagaaaacaaagagaagaaatcagaaaatttgaaacagaaa
atcttaaagaaagaacaagaggattcctcttctgatgttgaaaagtcatctccagagaaa
ggaagttgtaattcttctgaaaatgacaagactaaaaatgaaacagtggttaaagaaagg
aaaaggaggaatgtaagagagaaagtacctaaaagagcacaggttgatttatcttctgat
gctgacaaatctcccctgaaagaggagagttcttctgaagatgctgtgcaaagtaaaaga
cgacctgaagtgaaggaaaagaaaaaaataagccagaaaaagaaaattaccaagaaagag
cagaatgagtcatcctcttctgatgaggagtcttatgaagacaataagaaaaagattaaa
aaaggatccgtgaaagaaaataaaaggagtagcttaacagagaaaaagaaaataccaaaa
aaggttattgtctcttcctcctcctcatctgataaggaagaaaatgaagagcagaattcc
acaggtgatggaagcagtgatgagcagaaaattatgccagtgactgaaaatttaatgctg
tctgctggtacaggattttgtcagtcatcaggagatgagggagaggctaaatcaaggact
gttccaatggaggaggaggaagatgatgatgatgacgatcctgagaatagaattgccaag
aaaatgcttttagaagaaatcaaagccaatctttcctctgatgaggatgcatcttctgat
gaagagtcggatgaaggaaaaaagaaaactggaaagcaaactgaaaacacaggagacgat
gaagagaatgaaaaggaagataattctgaatcgaattcagaggaagaggactcaaagaag
cccagatacagacacagactgctgaggcacagactgacagtgagtgatggagaatctggt
gaagaaaagaaggggaaacctaaagaaacaaaagaagggaagcgcagaaatagaaggaaa
gtgagcagcgatgattcaaatggctcagagtttcatgaatctgcagttagtgaagaagtc
agtgagtctgaagatgaccaacgtccaagaacaaggtctgccaagaaagctgaggcagaa
gaaaatcagcgcagttacaaacagaaaaagaaacgaagacgtataaaagttccagatgat
tcttcaagtgaaaacaacaataagagtaattctgaagatgaggaaaatgatgattcaaaa
tctcctggaaaaggcagaaagaaaattaggaagattattaaagacgataagcttagaaca
gagacacaaaatgcacttaaagaggaagaagaaagaagaaaacgtatagcagaaagagaa
cgggagagagagaagttgagagaggtaatagagatagaagatgcttcacctctgaaatgt
cccattacaactaagctggttttagatgaagatgaagaaacaaaagagccattagtgcag
gttcacaggagtatagttaccagactgaaaccacaccaagtagatggtgttcagttcatg
tgggattgctgttgtgaatctgttaaaaagacaaagacatctcctggttctggatgcatt
cttgctcactgtatgggtctggggaagacattacaggtagtgagctttctgcacacagtc
ttgctgtgtgacaagctgaatttccggacggctcttgtagtgtgtcccctgaacactgcc
ttgaactggttgaatgagtttgagaaatggcaggagggtttagaagacgatgagaaatta
gaggtctgtgagttagcaactgtgaaacgccctcaagagagaagctatatgctgcagcgt
tggcaagatgaaggaggtgtgatgataataggctatgagatgtatcgtaatcttgcacaa
ggcaggaatgtgaagagtagaaaactgaaagaaatatttaataaagctttagtggatcca
ggccctgactttgttgtttgtgacgaagggcacatattgaaaaatgaagcatctgctgtt
tctaaggcaatgaattcaattcgttctaggagaagaataattctgacaggaacaccactg
caaaataatcttatagaatatcactgcatggttaactttattaaggagaatttgcttggt
tcaattaaagaattccgaaatcgatttataaatccaattcagaacggtcagtgtgcagac
tccactctggtagatgtcagagtaatgaagaagcgggcacatattctctacgagatgtta
gctggatgcgttcagaggaaagattacacagcattaacaaagttcctcccaccaaaatat
gagtatgttctagaagttagaatgacacctattcagtgcaagctctaccagtattacttg
gatcatttgacaggtgtaggtggcggcaatgagggtggacgaggcaaagctggagctaaa
ctgttccaggatttccagatgttgagcagaatatggactcatccctggtgtttgcagctg
gactatattagcaaagaaaataagggctactttgatgaagacagtatggatgacttcata
gcttcagattctgatgaaacttcaatgagtttaagttctgatgattatgcaaagaaaaaa
aaatccaaggggaaaaaagggaagaaagaatgtagttcaagtgggagcggcagcgataac
gatgttgaagtcattaaagtctggaattcaagatctcgtggaggtggagaaggaaatgca
gaagaacttggtaacaacccttcagcagttataaaatcagaagaaggtaaagctacttcc
tcatccaatcctggtagcccagctccagactggtacaaagattttgttactgatgcggat
gctgaggtgttggaacactctgggaaaatggttcttctctttgaaatccttcgaatggca
gaggagcttggggacaaagtcctggtgtttagccagtcccttatatcgttggatttgata
gaagattttctggagctggctaacagggagaaaactgacaaagagaagcctcctatctat
aaaggtgaaggaaaatggttccgaaacattgattactatcgcttggatggttcaactaca
gctcagtcaagaaagaaatgggctgaagaatttaatgatgaaactaacgtgagaggccgc
ttgtttattatatccactaaggcaggttcccttggaattaatctcgtggctgctaataga
gtaatcatctttgatgcttcttggaacccatcatacgatatccagagtattttcagggtt
taccgctttgggcagagcaaacctgtgtttgtgtacagatttttggcccagggtacgatg
gaagataaaatctacgatcggcaggtcaccaagcagtccctgtctttccgggttgtggac
cagcagcaagttgaacgtcattttactatgaatgagctaacagagctgtacacttttgag
ccggatttgctggatgatccgaattcagaaaagaaaaagaagagggacacaccaatgctg
ccaaaagatacaatcctggcagaattgcttcaaatcaataaggagtacatagtagggtat
cacgagcatgattcactcctggaccacaaggaggaagaggagctcacggaagaggaaagg
aaggctgcctgggcagaatatgaggcagaaaagaagggcttgaccatgcgtttcaacatg
ccgacagggaccaacatgcttcccactaatttcaactctcaaacgccgtatattcctttc
aatttgggcgctctgtcagcgatgagcaatcaacagctggaggacctcattaatcaagga
agagagaaggttgtggaagcaaccaacagtgtaactgcagcaagaattcagccccttgaa
gacatcatttcaactatatggaaagagaatgtaacgcttacagagagccaagtgcaggcc
ctggccctgagcagacaggcaagccaagagcttgatgttaagcgacgagaagccatctat
aacgacgtcctgactaaacaacagatgttgatcagttgtgttcagaggatactcatgaac
agaagactacagcagcagtacaatcagcagcaacaacagcacatgtcttaccagcaaaca
gcaatgagtcatctcatgatgccaaagcctccaaatttaatcatgaatccttccaactac
caacagatagatatgagaggaatgtatcagtcagtgtctggtggtatgcagccgccgcct
ttacagcgagcaccacccccaatgagaggcaaaaatgcagggccttcccaagggaaatcg
atgtga
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integrated database retrieval system
