Lagopus muta (rock ptarmigan): 125699607
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Entry
125699607 CDS
T09141
Symbol
ERCC6L
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125699607 (ERCC6L)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
125699607 (ERCC6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
TPR_2
TPR_11
AAA_34
TPR_1
SWI2_SNF2
MAS20
Motif
Other DBs
NCBI-GeneID:
125699607
NCBI-ProteinID:
XP_048815268
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Position
13:1633326..1640254
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AA seq
1278 aa
AA seq
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MADSEEERYRRLVIDAKEAAGSGDLELALQLFRQAAAIRPSEKLRGRMQRLEAALAELAA
TAEEEDDDGNFVDVCGSGLLLYGEMHGKLFQHQREGVAFLYRLHREGRPGGILADDMGLG
KTIQIIAFLSGMFDSELIRHVLLIMPTTLISSWLAEFARWTPGLRVKEFHGTSKTERTRN
LEKIQRKNGTVITSYQMLVNNWKQLASCHGQDFIWDYIILDEAHKIKCPSNKTTKCVYAI
PAKHRLLLTGTPLQNNLQEMWSLFDFACQGSLLGTAKTFRMEYENPITRAREKDATAGEK
ALGLKISENLMTIIKPYFLRRTKDDIKKNHAEKSDTPLPEDPREPSAPVMPSLTRKNDFV
VWVYLAPVQEKIYRNFLCLDHVKELLTTTRSPLAELTVLKKLCDHPRLLSARACTQLDLD
GQEHLEQDHGSEAAVLSGANKIDHLSDETLIQESGKMLFLLGLLERLREEGHRTLVFSQS
RKMLDIIERVLSSRRFKIMRIDGTVSHLTEREKRISAFQSNRDYSVFLLTTQVGGVGITL
TAANRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLI
RQTTGDKKNPFRYFSKQELRELFTLEDTRTSTTQIQLQSLHATQRQTDVQLDEHIAYLHS
LEMFGISDHDLIFTREVSHEEQAESEEAHQYIRQRVQKAHELVQLESQLRDVRMEGIRNA
AEEMWSRPPELASQSKRSPGLNNINNFVSPPAADKGENDKVIDLTEDMEVQVLDVSSKMT
NLTIELGEEKLAQETSGMDLELVTSSKKMEQPNIQESEQNLDLNSVPLSPGLGPLDKETQ
ILKQKRCSLYHINSDSLTEAGNGLSEPSQHSSNQSVMADDLKRLRDTEMADQALDSFAVS
DTEKNDVSELALSAPPPDLSDVLPEVHAEVQKYHVVETSLEDMSVPSLQDQVDFNLVLEE
SEGGPQDASNGERSMEHPEDEDFQLKAESLCKSPAKTCLSENGNSGNPCHTAEEDPNNSL
QGSEASEEGSAVLVSGRKKHKRRIVSDSEDENCFVMNLEEEQFDKRSSPLNSPLHQFIEG
ISASTPKDGRSIAKAIFSPKLTNSSNRSTASRRSLINKVVDEVEDIGEIMGSTDEEENSD
EEQEGFAEEEAEECSGESAEPEEEPAGETLNSTGESFRTEGTQSEEETDSSQEESTGDAE
LQSGEQLEYCTQESVPVDQSFSAPSGNYSTLVDRGKNLKDNGKLQEALNCFLQALDIKSG
DPEIMLMTLNLYRQLAQK
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagcgaggaggagcggtaccggcggctggtgatcgacgccaaggaggcagca
ggcagcggggacctggagctggccctgcagctgttccggcaggcggccgccatccgcccc
agtgagaagctgcggggccgcatgcaacgactggaggcagcgttggcagagctggcggcc
acagcagaggaggaagacgatgacggcaactttgtggatgtgtgcggcagcggcctgctg
ctctacggggagatgcacgggaagcttttccagcaccagcgggagggagttgccttcctg
taccgcctgcaccgggagggtcgacctggagggatcctggctgatgatatgggcctggga
aagaccatccagatcatcgccttcctctcaggcatgtttgacagcgagctcatcaggcac
gtcctgctcatcatgcccaccaccctgatcagcagctggctggctgagtttgctcgctgg
acccctggtctgcgtgtcaaggagttccatggcacgagcaagacagagcgcaccaggaac
ctggagaagatccagaggaagaatggcactgtcatcacaagctaccagatgctcgttaac
aactggaagcaacttgccagctgccacgggcaggactttatctgggactacatcatcctt
gacgaagcacacaaaatcaagtgcccgtctaacaaaacaacaaagtgtgtgtatgcaatt
cctgccaagcatcgtctcctcctcacaggcacgccgctgcagaacaacctgcaggaaatg
tggtccttgtttgactttgcatgccagggttctctcttaggaacagctaaaacgtttaga
atggagtacgagaatcctattactagggccagggagaaggatgcaactgcaggcgagaaa
gcgctgggacttaagatatctgagaacctaatgacaattataaagccgtatttcctcaga
aggactaaagatgatattaaaaaaaatcacgctgagaaatcagacactcctcttcctgag
gatccacgtgagcccagtgcccctgtcatgccatctcttactaggaaaaatgactttgtt
gtgtgggtgtacttggcaccagtgcaggaaaaaatctacaggaactttctctgtctagat
cacgtgaaagaattgctgacaacaacccgatcacctttggctgagctgactgtcttgaag
aagctgtgtgatcatcccaggcttctgtctgcaagagcatgtacccagctggacttagat
ggacaggagcacttggagcaggatcacgggagtgaagcagctgtactttcaggtgccaac
aaaatagatcatctgtctgatgagaccctgatccaggagtctgggaaaatgctatttctt
ttaggactcttagagagactgcgggaggaggggcaccgaacgctggtgttctcacagtcg
aggaaaatgctggatatcatcgagcgagttttgtctagcagacgatttaagatcatgcgc
attgatggaacagtgagccacctaacagaacgggagaagcgcatcagtgccttccagagt
aacagagactactctgtgtttctgctgacaacacaggttggtggcgttggtatcacctta
acagcagccaaccgagtggtgatctttgatcccagctggaatccagctacagatgctcag
gctgtagatagagcttataggattgggcagaaagagaacgtggtgatttacaggctaatt
acctgtggtacagtggaagagaaaatatataggcggcaagtatttaaggattcattaata
agacagactacaggtgacaaaaagaacccattcaggtatttctccaaacaggaactaagg
gagcttttcacattagaagatacacgaacatccacaactcagatccagctgcagtctttg
catgccacccaaagacagactgatgtgcagctggatgagcacattgcttatttgcactct
ctggaaatgtttggcatatccgatcatgacttaatatttacaagggaagtgagccacgag
gagcaggctgagagtgaggaagcccatcagtacatccgacagagggtacagaaggcccac
gagctggttcagttagagtctcagcttagagatgtgaggatggaagggatccgaaatgct
gctgaggagatgtggtcaagaccaccagaactggcttcccagtcaaagagatctcctggg
ttgaacaatatcaataactttgtttcaccgccagcagccgacaaaggtgaaaatgacaaa
gttattgatcttacagaggacatggaagtccaggttcttgatgtcagctctaagatgaca
aatctgactattgagttaggtgaagagaaactggcacaagagacatctggtatggactta
gagctagttactagcagcaagaaaatggaacagcccaatatacaagaatctgaacaaaat
ctggacttgaacagtgtaccactgtcacctggacttggtccacttgataaagagactcaa
attcttaaacagaaacgatgttctctttatcacataaattcagatagcttgactgaggct
gggaatggcctgtctgagccttctcagcattcttctaaccaatctgttatggctgatgat
ctcaaaaggttacgagatacagaaatggcagatcaggcacttgactcatttgctgtctca
gacacagagaagaatgatgtttctgagctagctttgtctgcccccccaccagatttatca
gatgttttaccagaagtccatgctgaggtccagaaatatcatgtggtggaaaccagtttg
gaggatatgtctgtgccttctctccaggatcaagttgacttcaatctggtcctggaagag
tctgaaggtggaccgcaggatgcctcaaatggggagagatcaatggagcacccagaagat
gaggacttccaactaaaagcagaaagtctgtgtaaatcaccagcaaaaacctgcttaagt
gagaatggcaactctggaaacccctgtcacacagctgaagaagatccaaataattctttg
caagggagtgaagcgtcagaggaaggcagcgccgtcctcgtttcaggtagaaagaagcac
aagagaaggattgtttcagatagtgaggacgagaactgttttgttatgaacttggaggaa
gagcagtttgataaaaggtcctctcccctgaacagccctctgcatcaatttatagaagga
attagtgcatctactcctaaggatggcagaagtatagcaaaagccatcttttctcccaaa
ttaactaacagcagtaacaggtctacagcttccaggagatctctcatcaacaaggtggtg
gatgaagttgaggatattggtgaaatcatgggaagcacagatgaagaagaaaacagcgat
gaggagcaagaaggctttgcagaagaagaagcagaagagtgtagtggggagtctgctgag
cctgaagaagaacctgctggagaaacacttaattcaactggagagtccttccgtacagag
ggcacgcagtctgaagaggagaccgactcatctcaggaggaatccactggtgatgcagag
cttcagtcaggtgagcagctggagtactgcacccaggaaagcgtccctgtcgatcagagt
ttctctgccccctcaggtaattacagtaccttggtggacagagggaagaacctgaaggac
aatggaaaactacaagaggcactgaactgtttcctgcaagctcttgacataaaaagtgga
gatcctgaaattatgcttatgactctaaacttgtatagacagctagcccagaaatga
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