Lagopus muta (rock ptarmigan): 125699819
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Entry
125699819 CDS
T09141
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125699819 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125699819 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmut04147
]
125699819 (VPS36)
Membrane trafficking [BR:
lmut04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
125699819 (VPS36)
Exosome [BR:
lmut04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125699819 (VPS36)
Exosomal proteins of colorectal cancer cells
125699819 (VPS36)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
BBL5
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
125699819
NCBI-ProteinID:
XP_048815725
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Position
1:168574435..168598170
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AA seq
386 aa
AA seq
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MDRFSWTSGLLELGETLVLQQRGVRLYDGEEKVKFDSGVLLLSTHRLIWRDQKNHECCIA
IPLSQVVFIEEQAAGIGKSAKIVAHLHPASPNKEPGPFQSSKYSYIKLSFKEHGQIEFFR
RFSEEITQRRWENMPAGQTIQVNKDPQAGRVRAVGIVGIERKLEAKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLAGMLQTPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLEPLKLP
LRLQIFDSGVMVIELQSHNEEEMVASALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggatcggttctcctggaccagcgggctgctggagctgggagagacgctggtgctccag
cagcgcggcgtgcgtctctacgacggggaggagaaggtgaaatttgatagtggagtacta
ctgcttagcacgcacagattaatatggagggatcagaagaatcatgaatgctgcattgct
atacctctgtctcaagttgtctttattgaagagcaagcagctgggataggaaaaagtgcc
aaaatagtcgctcatcttcatcctgcttctccaaacaaagagcctggcccattccaaagc
agcaaatactcctacataaaactttctttcaaagagcatggacaaatcgagttctttcga
cgattctcagaagaaattacacagaggagatgggagaacatgcctgctggacagaccatt
caggttaacaaggatccacaggcaggaagagtaagagctgtaggaattgtagggatcgaa
aggaaactagaagcaaaaagaaaagagactgacaaaaacatttccgaggcttttgaggac
cttagtaagctaatggagaaggctaaggaaatggtggagctatccaagtcaattgctaat
aagattaaagaaaaacaaggtgacatcacggaggatgagactattaggttcaaatcatat
ctgctgagtatgggcatagccaatccagttactagggaaacacacggatctggtactcat
taccacatgcagctggcaaagcaactagctggaatgctgcagacaccattagaggagaga
ggaggaatcatgtcacttacagaagtgtactgtctggtaaaccgtgcacgaggattggag
ttgctctcaccagaagatttagtaaatgcttgtaagatgctggagccactgaaactgccg
ctacggcttcagatatttgacagcggtgtgatggtgattgagctccagtctcacaatgaa
gaggaaatggttgcttctgctttagagacagtatctgaaaagggctctctcacagctgat
gagtttgcgaagctggtgggaatgtctgttctcttagccaaagaaaggctgcttcttgct
gaaaagatgggccatctttgcagagacgattcggtggaaggcttgagattctacccaaat
ttatttttaacacaaagctaa
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