Lagopus muta (rock ptarmigan): 125699822
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Entry
125699822 CDS
T09141
Symbol
NUP62CL
Name
(RefSeq) nucleoporin-62 C-terminal-like protein
KO
K14306
nuclear pore complex protein Nup62
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125699822 (NUP62CL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125699822 (NUP62CL)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125699822 (NUP62CL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
Motif
Other DBs
NCBI-GeneID:
125699822
NCBI-ProteinID:
XP_048815731
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Position
13:complement(1864847..1873442)
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AA seq
575 aa
AA seq
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MNQFNFGSTPAGGGFSFSTPKTTASTTAATGFSFTSAPSSGFTFGSAAPTPASSQPVTPF
SFSTPASSALPPTFSFGTPTTAATATPAAGVFPLGGNAPKLNFGATSTTQTTGITGGFGF
GTSAPSSAPSSQAAAPSGFMFGSATTTTSSTTAAQPGTTGGFTFSSGTTTQAGTTGFSIG
TTSTAAPQAAPTGLTFGAAPAAAAATTTASLGSTAQPAAAPFSLGGQSSGLNFGSLVSTA
ATGAPTATLTASTSQGPTLSFGSKLGVTTTASTTTAASTAPLLGSTGPVLFASIASSSAP
ASSTSTGLSLGAPSTGAAGLGTSGFGLKPPGTTAATTSTATSTSASGFALNLKPLTTTGT
MGAVTSTAAITTAATSAPPVMTYAQLESLINKWSLELEDQEKHFLHQATQVNAWDRTLIE
NGEKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLTPLEESVKEQSGTIYLQHAD
EERERTYKLAENIDAQLKRMAQDLKDIIEHLNTSGRPADTSDPLQQICKILNAHMDSLQW
IDQNSALLQRKVEEVTKVCESRRKEQERSFRITFD
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttcaacttcggctcgaccccggcgggcggcggcttctccttcagcacgccg
aaaacgaccgccagcaccaccgcggccaccggcttctccttcacgtccgccccctcctcg
ggattcacgttcggcagcgctgcgccgacgcccgccagcagccagcccgtcacgcccttc
tccttcagcacaccggccagcagcgcgctgccccccaccttcagcttcgggacgcccacg
acagccgccaccgccaccccggctgccggcgtgttcccgttagggggaaatgcaccgaaa
ctcaactttggagccacgagcacaactcaaactactggaatcacaggaggatttgggttt
ggtacctctgcacccagcagcgcgccctcaagtcaagcagcagccccttctggcttcatg
tttggatctgccaccaccaccaccagcagcaccactgcagctcagcctggcacaaccgga
gggttcacattttccagtggcaccacgactcaggcaggaacaaccggcttcagcatcggt
accacaagcaccgcagctccgcaggcagcgcccacggggctgacctttggagcagcacca
gctgctgctgctgccaccaccactgccagcttagggagcacggcccagcctgcagcagct
cccttcagcctcgggggtcagtcctctggtctgaacttcggatccttggtttcaacagca
gccactggtgcacccacagcaacactgactgcgagcaccagccagggacccacgctgtcc
tttggaagcaaactgggagtaacaactacagcatctacaacgacagctgccagcacagct
cccctgcttggttccacaggccctgtgctgtttgcatctatagcgagttcttcagcacca
gcctcatccaccagcacagggctctcacttggtgccccttctactggtgcagctgggctt
ggaacgtctggatttggattaaagcctcctggaacaacagctgcaacaaccagcactgcc
accagcacttctgcttctggctttgctttgaaccttaaaccattaactacaaccggtaca
atgggagctgtgacttctacagctgctataaccacagcagcaaccagtgcacctcctgtg
atgacgtacgcccagctggagagtctgataaacaagtggagcctggagctggaggatcag
gagaagcatttcctccatcaggctacacaagtgaatgcctgggatcggacactgatagag
aatggagagaagattacttcactgcacagagaagtagagaaagtgaagcttgatcagaag
agactggatcaggagctggacttcattttgtcccagcaaaaggagcttgaagacttgctg
acccctctggaggaatcagtgaaggagcagagtgggaccatttacttgcagcacgcggat
gaagaacgggagaggacctacaagttggctgagaacatcgacgctcagctgaagcgaatg
gcacaagatctcaaggacatcattgagcacctgaacacttcgggacgccccgcggacacc
agcgacccgcttcagcagatctgtaagattttgaatgcacacatggactcactgcaatgg
attgaccagaactcagccttgctgcagaggaaggtggaggaggtgacgaaggtttgtgag
agccgccgcaaggagcaggagcgcagcttccgcatcaccttcgattga
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