Lagopus muta (rock ptarmigan): 125699894
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Entry
125699894 CDS
T09141
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125699894 (AFF2)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125699894 (AFF2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
125699894
NCBI-ProteinID:
XP_048815868
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All DBs
Position
13:complement(17938910..18274442)
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AA seq
1267 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRNALKRKEWERRNQEVQQDEDLFASGFNLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKNSVPQTPIDKNEQNFFSEQRNRMIP
SHQISGHSSTSMPPPSSLSSNSVLLHGHQSNRKSRTDWSRSGHNSSGAQPSQSSSQQSRT
KHSSSHDQTQGRYEDLYNCQSEQHKSGGTEEANSMAASSHSRRHTHSKSAAGEHTYKENS
HSKSPTELEFVGHGPGSPLPSTSLLSANNGLSSQNFPPGLHCKSTMVQQKPTAYVRPMDG
QDQVPNDSPELKPPVEIESGYGNQSFGTLLEGKVNTPSSKNKVPKLNIPPVGEVTLPNDS
SCVEEILREMTHSWPPPLTAIHTPGKAEQTKFSIPSKDSQHLTSGYNVQKWSDPGGKVAT
KSVPQKSMLEDDLKLSSDEDDSEQAAEKTKLRNIPVNGLPVSVAHAAGLAHSSGGSGSSS
ESESSSESDSDSESSSSDSDCNEESRSATPEPEPPSTNKWQLDKWLNKVNPHNKTIISNQ
NEPHSETSSQPQSSQQAEGQNKGKLSNSLPPTDSKDRAILSPIREKAKPRVAQKTPEAKS
SKQKSPAHNEPVAQRTTGKKQPKKVERTSSVEEYNWPKPNNTSNTPKEKDTQEPPEQPKV
RTKAAVGKTAPRKEPRTSTGLTSEKKKYRGPSKIVPKSREFIETDSSTSDSNTDQEESLQ
AKILPACSGPANGIKVKDSGSNILSVSSLTSNGSNTSIDQTSNDLEEQLFSPIPIVQNEL
LSPLREYEELKSLWVKIDLSLLSRIPGQEPFETTSVKTEPREANVKHRRPSRESPTPAAE
KTSTKSKRKHKSENLETFVETKKQRLEDPSASCLLPPCISPIPNHRLTSTKESSSNSVKK
MAKKREEKLFPPPLSPLLDEPVHRRHSTDNSSFSQETNVTNTPQTSSSSSSVSKHRKNEN
KSSSNPKGICEEETHTAPTANTVLDTNHLETDVWSAMPTLSNGNSESRRPKITFDDVLHN
ADYYMQEAKKLKHKADALLEKFGKAVNYADAALSFIECGNAMERDPLEAKSPYTMYSETV
ELIRYAMRLKNFTGSSATEGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKN
SSKASQAPSPWGGNGKSTETPSPMSLSPSPVSSAGGSAGTTGSSSAGTITIPQRIHHMAA
SHVNITNNVLRSYEHWDMADKLTKENKEFFVDLDSVMGPLTQHSSMTNLVRYVRQGLHWL
HIEAHLL
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgactttttcagggactgggacttagagcagcagtgtcactatgagcaa
gaccggaatgcacttaagagaaaagaatgggagagaagaaaccaagaagtccagcaagat
gaagacctctttgcttcaggttttaatctctttggggaaccctacaagacaaataaaggt
gacgctcttgcaaaccgtgtccagaacacattgggaaactatgatgagatgaaggatctg
ctaactaaccattccaatcagagccatcttgtaggaatcccaaagaattctgtcccacag
acgcccattgacaaaaatgaacagaactttttctcagaacaaagaaacaggatgatccct
tctcatcagatcagtggccactcatcaacatcaatgcctcctccttcgtctctgtcatct
aattctgttttgttacacggtcaccagagcaacaggaagtcgaggacagactggtcacgc
agtggtcacaactctagtggtgcccagccaagccaatccagtagtcagcagagtcggaca
aagcatagctcttcccatgaccagacacagggcaggtatgaagacctctataattgtcag
agtgagcagcataaaagtggaggaactgaggaagcaaattctatggcagcatcttcacat
tcaaggcggcatactcattcaaagtcagcagctggagaacatacttacaaagaaaacagt
cattcaaagtcacccacagagcttgagtttgtaggtcatgggcctggatctccacttcct
tccacatctttgttgtctgcaaacaatggtctttcaagccagaatttcccaccaggactt
cactgtaaaagcaccatggtccagcaaaagcctacggcatatgttaggccaatggatggt
caggaccaggtacccaatgattcacctgaactgaaacctcccgtagaaatcgagagtgga
tatggaaatcagtcctttggaacactgttggaaggaaaagtaaacacacctagttcaaag
aataaagtaccaaagcttaatattcctcctgttggtgaagttacccttcccaatgactcc
agctgtgtggaagaaatactgcgtgagatgacccattcctggcctcctcctcttactgct
attcacactcctggaaaggctgaacagaccaagttttctatcccaagcaaggactcccag
catctgacctcaggatacaatgtacaaaagtggagtgatccaggagggaaagttgcaact
aagtcagtgccacaaaagtcgatgcttgaggatgatctcaaactcagcagtgatgaagat
gacagtgaacaggctgctgaaaagacaaaattgagaaacattcctgtaaacggcctgccg
gtgtcagtggcacacgcagctggcttagcccattccagcggtggctccgggagctccagt
gagtccgagagcagctctgagtctgactccgacagcgagagcagctccagtgacagcgac
tgcaacgaggagtcacgcagtgccacgccagagcctgaacccccctcaacaaacaaatgg
cagctggataagtggctgaataaagtgaacccccacaacaagaccatcatcagcaatcaa
aatgagcctcacagtgagaccagctcccagccgcagagcagccagcaggctgaaggacaa
aacaaagggaagctcagcaacagcctgcccccaaccgattccaaagaccgggcgatcctc
agtcccatccgtgagaaagccaaaccacgggttgcccagaaaaccccagaggcaaaaagc
tccaagcagaagtcgccagctcataatgagccagttgcacaaaggactactgggaaaaag
caacccaaaaaggtagaaaggacttccagtgtagaagaatataactggcccaaaccaaat
aataccagcaacactcccaaagaaaaagacacacaggaaccccctgagcagccaaaggtt
cgaactaaagcagcagttggcaagaccgccccaaggaaggaacctcgaacgagcacaggt
ctcacttcggagaagaaaaagtacagaggccccagcaaaattgtccccaagtcccgggaa
tttattgaaactgattcatctacttctgactcaaatacagatcaggaggagagcctgcag
gctaagatattgccagcttgtagtggaccggccaacggcatcaaagtgaaggactctggc
agtaacatcctcagtgtaagtagcttaactagcaatggcagcaacacatccatcgaccag
accagcaatgacttggaggagcagctcttttctcctatcccaattgttcaaaatgaactt
ctgtccccactgagagaatatgaagaactcaaatctctttgggtgaaaatagacctcagt
ttactctccaggatacctgggcaagagccttttgagaccacatctgtgaaaactgaacca
agagaggcaaatgtgaaacacagacgaccatctcgagagtcccctaccccagcagctgag
aaaacatccacaaaatccaaaaggaaacacaagtcagaaaacctggaaacctttgttgaa
accaagaagcagcgcctggaggacccttcagcttcatgcttgctcccaccttgtatctct
ccgataccgaatcacagattaaccagcactaaagagagcagcagtaactcggtgaagaag
atggcgaagaaaagagaagagaagctcttccctcctccattatcccccctgttggacgag
cctgtgcaccgtcggcacagcactgacaacagctccttcagccaagaaaccaacgtcacc
aacactcctcagaccagcagctcttcctcctcggtttctaaacacagaaagaatgaaaat
aaatcttcttctaaccccaaaggaatctgtgaggaagaaacacacactgcaccaacagcc
aacactgttcttgatacgaaccatctagaaacagacgtctggtctgcaatgccaactctt
tccaatgggaattctgagtccagaagacctaaaatcacatttgatgatgtgctccacaat
gcagattattatatgcaagaagctaagaagctaaagcataaagcagatgcattgctggag
aagttcggcaaagcagtgaattatgctgatgctgccctgtccttcatcgagtgtgggaac
gctatggagcgagatccattagaagctaaatctccatataccatgtactcagagactgtg
gaactcatcaggtatgcaatgaggctcaagaatttcacaggctcttctgccacagaaggg
gacaagaaactagcagttttatgctaccgatgcttatcgcttctgtacttgagaatgttt
aagctaaagaaggaccatgctatgaagtactccagatctctgatggaatattttaagaac
tcttcaaaagcctcacaggccccctcaccttggggcggcaatggaaagagcacagaaaca
ccatcacctatgtccctgagtccatcccctgtcagctctgccggaggcagcgcaggcacc
actggctcctcctcagcagggaccatcaccatccctcagcgcatccaccacatggctgcc
agccacgtcaacatcaccaacaatgttctgcgaagctacgagcactgggacatggctgac
aagctgactaaggagaataaagaattctttgtagacctggactcagtgatgggaccctta
acacaacacagcagtatgaccaatctggttcgttacgttcgccaaggactccactggctc
cacattgaggctcatttgttgtag
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