KEGG   Lagopus muta (rock ptarmigan): 125699911
Entry
125699911         CDS       T09141                                 
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut04382  Cornified envelope formation
lmut04510  Focal adhesion
lmut04512  ECM-receptor interaction
lmut04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125699911 (COL4A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125699911 (COL4A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125699911 (COL4A5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    125699911 (COL4A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lmut04147]
    125699911 (COL4A5)
   00536 Glycosaminoglycan binding proteins [BR:lmut00536]
    125699911 (COL4A5)
Exosome [BR:lmut04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   125699911 (COL4A5)
Glycosaminoglycan binding proteins [BR:lmut00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   125699911 (COL4A5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 125699911
NCBI-ProteinID: XP_048815903
LinkDB
Position
13:complement(13702956..13784537)
AA seq 1689 aa
MEWRWRSRSPAVGCVVLLLLGCWGPREAAAAACHGCTSLTKCDCSGVKGEKGERGFPGLE
GQPGLPGFPGPEGPPGPRGAKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPP
GPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEPGEIITSLLPGHKGDQGFP
GLPGIPGPPGPIGIPGPVGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQG
PPGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPQGPPGLPGGIKGEKGEQGEPGK
RGKPGKDGEPGQPGRDGLPGGPGVNGVPGRDGEKGEKGDTGPPGPPGSVITRPGIDATVG
PKGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGITTVGPPGPPGLPGERGQKGDPGLPGV
SIPGQPGLDGPRGPPGPPGPPGPPAPSVPPGEGLCERGPPGPPGIPGQQGFAGERGQKGD
QGDTCFNCIGTGISGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGPPG
APGRPGPKGDPGDVLASPRMKGDKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSV
AFKGEMGIPGDPGVPGLPGDKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGDPG
QTITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRGLSGIPGAKGEPGIPGIGLPGPPGPKG
FPGTPGPPGAPGTPGRPGLDGPPGPPGFPGQKGDRGFGVPGPPGPPGPPGIKGVQGPKGD
PGFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGPPGPPGPVGPP
GLQGVPGEKGDPGPPGFDVPGPPGDQGTPGYPGPPGLPGPQGSPGPPGRDGIPGFPGAKG
EMGVMGAPGPPGPPGTPGRSGLPGLKGNNGLPGPPGPPGPLGQKGVKGEAGLPGPPGKVD
PKQLGAKGEKGEPGVPGIPGLSGQKGYQGLPGDPGPPGLSGPPGAPGLPGIKGDMGLPGQ
PGPTGPPGLKGAMGEMGLPGPPGSKGSQGIAGRPGQPGPAGFPGLKGEKGDPGLSSIGIP
GLPGPKGDLGLPGYPGSPGSKGVAGNPGLPGLPGSPGAKGEPGLPGFPGTPGIPGPKGIE
GPPGNPGLPGPPGPVGDTGRPGPPGPPGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGPPG
LPGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGLPGPPLEGPKGSPGP
PGVPGRPGSPGPEGPRGPPGSGGLKGEKGNPGQPGPPGLTGQKGDQGPPGRQGDPGRPGL
NGMKGDPGVPGVPGFPGMKGPTGPAGPAGLMGSQGLPGPPGPPGLPGTIGRSIVVKGDPG
PPGPPGLPGSKGPPGLAGPQGLPGPVGVPGDPGRDGLPGFDGPAGRKGERGLPGQPGSRG
IQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGFSLLYVQGNE
RAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLTGQN
IQPFISRCVVCEAPAMVIAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGAEGSGQALAS
PGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKAGDLRTRIS
RCQVCMKKT
NT seq 5070 nt   +upstreamnt  +downstreamnt
atggagtggcggtggcggagtcgcagcccggccgtgggctgcgtggtgctacttctgctg
ggctgctgggggccgcgggaggcggcggcggcggcttgccatgggtgtacatctctaacc
aaatgtgattgcagtggagttaaaggagaaaagggtgaaaggggattcccaggcttggaa
ggacagccaggtctgcccgggttcccaggcccagaagggcctcctggtcccagaggtgca
aagggtgatgatggacttccaggacctattggccccaagggaatcagaggtccgccaggg
ctcccaggatttccaggaacaccaggacttcctggtttaccaggacaagatgggccacca
ggacctcagggtatcccaggctgcaatggaacgaagggagaacgtggattcccaggcagt
ccaggttttccaggtttacaagggcctcctggaccccctggtctgccaggtatgaagggc
gaaccaggtgaaataattacatccttgctgccaggacataagggtgaccaaggatttcca
ggtcttccagggatacctggtccacctggtcccataggaataccaggtccagttggtcct
ccagggcccccaggtttgacaggacctcctggtccaccagggctaccaggacctaagggt
aatatgggcttgaatttccaaggacctaaaggtgaaaaaggtgaacaaggtctccaagga
cctccagggccaccaggacaaattggagagcagaagagaccaaatgacattgagtttcag
aaaggagatcagggtattccaggtgatccagggccaccaggacttccagggcctcaaggc
cctcctggtcttcccggtggcataaagggtgaaaaaggtgagcaaggagagccaggcaaa
agaggaaagccgggcaaagatggagaacctggtcagcctggtagggatggtttacctggt
ggacctggagtaaatggtgttccaggaagagatggtgaaaagggtgaaaaaggtgacact
ggtcctcctggtcctcctggaagtgtcattacaagaccaggcattgatgcaacagtggga
ccaaaaggtagcaaaggattgccaggactcccaggagccaaaggggagcgtggattctct
ggtaggccaggcccacctggcttgccaggttctccagggatcactactgttggacctcct
ggcccacccggcttacctggtgagaggggccagaagggagatccaggtttacctggtgtt
tccattcctggacaaccaggacttgatggaccacggggacctccagggcctccaggtcct
ccaggaccacctgcaccatctgttcctcctggtgaagggttatgtgagcggggtccacca
ggtcctccaggaattccagggcaacaaggctttgctggagagagaggccaaaaaggtgac
caaggagacacatgcttcaattgtataggaactggaatatctgggcctcctggtgagaga
ggaccaccaggacctccaggtagtccaggttctcctggttttcctgggccaaaaggtgaa
aaggggcttccaggattaactggccttgtagggccaccaggattcccagggccaccaggt
gcacctgggagacctggtcctaaaggagaccctggggatgtcttggcttcaccaagaatg
aaaggtgacaaaggagaccctggtttccctggacctccaggtcttcctggaatagatggc
actcctggacgagatggattgccaggtctgcctgggcctaaaggggagcctggcagtgtt
gcattcaaaggagaaatgggaattccaggtgacccaggagtaccaggtcttcctggagac
aaagggcttcctggacctcctggtttcggtccacaaggttcacctggtgaaaagggcatc
caaggtgtatcaggtcgtccagggcctcctggagttcctggtccaaaaggtgaccctggt
cagactattacagaaccaggagttcctggtccccctggtcctccaggaagaaatggtgac
ccaggtcttccaggggatcctggtcagccaggtcagcgtggcttatcaggcatcccaggt
gcaaagggagagccaggtattcctggcattggacttccaggtccaccgggcccaaaaggt
ttcccagggactccaggcccacccggagctccaggaactccaggtcgccctggcctagat
ggacctccaggaccacctggtttcccaggccagaagggggatcgtggatttggagttcca
ggaccacctggacccccaggaccaccaggcataaaaggagttcaagggcctaaaggtgat
cctggcttcccaggaaaccctggacttccaggacgggcgggttttgatggaactccagga
ccaaaaggtgaccctggaccaagcggaccaccaggccttccaggcccaccaggcatccct
ggcattggaggccaagggccacctggacctccaggaccaccaggtcctgttggcccacca
gggttgcagggcgtaccaggagagaaaggggatccaggtcctccaggcttcgatgttcct
ggtcctccgggtgaccaaggaaccccaggatatccaggaccccctggcctcccaggccct
cagggttcacctggtccacctggtcgggatggaatacctggatttccaggtgccaaaggt
gagatgggcgtcatgggagcccctgggcctccagggcctccagggactcctggaagaagt
ggccttcctggcttgaaaggtaataatggattgcctggcccgccagggcctcctgggcca
ttaggacagaaaggtgtcaaaggtgaagcaggcctgccaggcccacctggaaaagttgat
ccaaagcagctaggagcaaaaggagaaaagggcgagccgggtgttccaggtattcctggt
ttatcagggcagaaaggctatcaaggtctcccaggtgacccaggtccaccaggactgagt
ggtccaccaggtgcaccagggttgccaggcatcaaaggagacatggggcttcctgggcag
ccaggaccaacaggacctccagggctaaaaggtgccatgggagagatgggccttccaggt
cccccaggaagcaaaggcagccagggaatagcagggcgtccagggcagcctgggcctgct
ggatttcctggactgaaaggggagaaaggtgatcctggtctttcaagcattggcattcct
ggtctgcctggaccaaagggtgatcttggtttgcctggatatccaggtagtccaggcagt
aaaggcgtagctggaaatcctggtttgcctggattgcctggcagtccaggtgcaaaagga
gagccgggccttcctggattcccaggaacaccaggaattccaggaccaaaaggtatcgaa
gggcctccaggtaatcctggtctgcctggaccacctgggccagtaggtgatactggtcgt
cctggccctcctggtcctcctggggagaagggacagcctggtcgagatggtatccctgga
ccagctggtcagaagggtgaaccagggctgccgggctttgggcgcccaggacctccggga
ctcccaggattatcagggcaaaaaggtgaactggggttacctggcccaccaggaccccct
ggacttccaggtctgaagggagaaccaggtttccaaggattccctggcctacagggtcca
ccaggtccaccaggattaccggggccacctctggaaggtcctaaaggtagccctggccca
ccaggcgttccaggaagaccaggttcaccaggcccagaaggtccacgagggccaccaggc
agtgggggactcaaaggggaaaaagggaatccaggacagcctggcccacctggcctgact
ggtcaaaagggagaccaaggaccacctggacgccagggagatcctggtcgtcctggtctc
aatggaatgaagggtgaccccggggttccaggcgttccgggattcccaggtatgaagggt
cccactggacctgcaggacctgctggcctcatgggcagtcaagggctgccaggcccacca
ggtccaccaggtttaccaggtaccatcggacgaagcattgttgtcaaaggtgaccctggt
cctccagggcctccaggattgcctgggtcaaaagggccacctggactggcagggccacaa
ggattgccaggtccagttggtgttcctggtgatccagggcgagatggactccctggtttc
gatggcccagcaggacgtaaaggagagaggggtcttccaggccaaccagggtcacgagga
atacagggaccccctggtcctgatggcttacaaggcccacctgggcctcctggaacagct
tctgttgctcatggattccttataactcgtcacagccagactagggatacaccactatgt
ccacaaggaacttcaagaatatatgatggattctctcttttgtatgtgcaaggaaatgag
agagcacatggccaggacttgggtactgctgggagctgtcttagacgctttagcaccatg
cctttcatgttctgcaacatcaacaacgtttgtaattttgcatcaaggaacgactattcc
tactggctgtcaactccagagccaatgccgatgagcatggagccgctgactgggcagaac
atccagccattcattagcagatgtgttgtgtgtgaagctcctgctatggtgatagctgtc
cacagtcagaccattcagattccttcgtgtcctccaggctgggactccctatggatcggt
tactctttcatgatgcacaccagtgctggagcagagggctctgggcaggccttggcatca
cctggatcctgtttagaagaattccgctcagctccatttattgagtgtcatggtcgtggc
acttgtaactactatgccaattcatatagtttctggctggcaactgtagaggtgtcagaa
atgttcagtaaacctcagtcagagacactgaaagctggagacttgaggacgcgtattagt
cgctgccaagtttgcatgaagaagacgtaa

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