KEGG   Lagopus muta (rock ptarmigan): 125699947
Entry
125699947         CDS       T09141                                 
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
lmut  Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lmut04121]
    125699947 (RLIM)
Enzymes [BR:lmut01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125699947 (RLIM)
Ubiquitin system [BR:lmut04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125699947 (RLIM)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 zf-RING-like zf-RING_16 zf-RING_4
Other DBs
NCBI-GeneID: 125699947
NCBI-ProteinID: XP_048815978
LinkDB
Position
13:complement(12168116..12181547)
AA seq 593 aa
MESSDSSDKGNIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLRRLHQVKEGPPQQNSDENRGAESTEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSVEPSSGEDLENSQSDSEIPRS
ESPSARQPGSERSTSEELTEEASPRGQRRARSRSPEQRRTRARTDRSRSPINPVSEAPRR
SHHNTSSQTFDHSAVNEAEGSSRTRQHVTLRQHAVGTEIPSENAVLFSAPETRPVPQAAG
SSETNGASESAAPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYESE
RGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYF
MYSDSDADPSGPTPNQNVDASEPQNGGGGSSSNESTDVSSGEVFEGSNEGGSTSGARREG
RNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKTCS
VCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggaaagctcagattctagtgataaaggaaatattgatcaatcagaagcacaacggcag
agtcagctggatcgcttagatcgagaagaggctttctatcagtttgtaaacaacctgagt
gaagaggactacaggcttatgagagacaacaatttgctaggaacaccaggtgaaattact
gaagaagagttgctgagaaggctgcaccaagttaaagaaggtccgccacagcaaaacagt
gatgagaatagaggtgcagagtccacagaagatgtttcaaatggagattctataatagac
tggcttaattcagtccgacagactggaaatacaacacgaagtgggcagcgaggaaaccaa
tcttggagagccgtgagccggactaacccaaatagtggtgacttcagattcagtttggaa
ataaatgtcaaccgtaataatgggaacacaaatcctgaaactgagaatgagccatctgta
gagccttccagtggggaggatttggaaaacagccaaagtgactctgaaattccaaggtct
gaatcaccatctgcaaggcagcctggatcagaaaggagcacttcagaagagttaactgag
gaagcttctcctagagggcagaggagagcgagaagtaggagcccagaacagcggagaaca
cgggctaggactgatagaagtaggtcacctattaatccagtgagtgaggctcctcgcagg
tctcatcacaatacatcatctcaaacgtttgaccattcagcagtgaatgaagctgaggga
agctctagaactaggcagcatgtgacattaaggcagcatgcagtggggactgagattcct
agtgaaaatgcagttctgttttcagcccctgaaacaagacctgttcctcaagcagcaggt
tcttcagaaactaatggtgccagtgagtctgcagctcctggacagaggcctcctaccata
gtgctcgacctccaggtgagaagagttcgtccaggagagtatcggcaaagggacagcata
gccaacagaactcggtcccgctcccagactcctaacaacacagtcacttacgaaagtgaa
cggggagggtttaggcgtacgttttcacgttcagaacgggctggagtgagaacttatgtc
agcaccattaggattcctattcgtaggatcttaaatacaggcttaagtgagactacgtca
gttgcaattcagactatgctaaggcagatcatgacaggctttggagagctgagttacttt
atgtatagtgatagcgatgcagatcctagtggcccaactccaaatcagaatgtggatgct
tctgagccacagaacggagggggtggtagttcaagcaatgaaagtacagatgttagctca
ggggaggtgtttgaaggtagtaatgaaggtggttcaacatctggtgccagacgggaaggt
cggaatacgagaggatcggtcacgtttgaagaaagtggttctttaccattccttagccta
gcacaatttttcctactaaatgaagatgatgacgaccaaccaagaggactcaccaaagag
caaattgacaacctagcaatgaggaatttcggtgagagtgatgctctgaaaacatgtagc
gtgtgtattacagagtacacggaaggaaacaagcttcgtaaattgccttgttctcacgag
tatcacgtccactgcatcgaccgctggttatcagaaaattccacttgtcccatttgtcgc
agagcagtcttagcttctggtaacagagagagtgttgtctaa

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