Lagopus muta (rock ptarmigan): 125699966
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Entry
125699966 CDS
T09141
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125699966 (PRDM4)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125699966 (PRDM4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf_PR_Knuckle
zf-C2H2
zf-C2H2_4
SET
zf-met
zf-C2H2_jaz
PyrI_C
Mu-like_Com
Motif
Other DBs
NCBI-GeneID:
125699966
NCBI-ProteinID:
XP_048816015
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Position
1:52511373..52529397
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AA seq
808 aa
AA seq
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MYPRMNEMNLSPVGMDQLTSSSVGNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGIPERNYTLPPPPYPHLESSYFRHILPGILSYLADRP
PPQYIHPNTINVDSNPALSVPSNPSALDPYQPSGTVGLEPGIVPMDSRAVNAHGAQNMHP
SDSHEVALDSTITMESVSRVTSPISTDGMTEELTMDDVARDHSQIPNGSRSHEPLAVDTV
GSNLTPDAVGHGGVIPIHSSTLELPVPVVMEPDHIAGRVAGMSDSTLNDSIHTVAMSTNS
VSVALSTSHNLASLDSVALHEVGLSLEPVAVSSINQEVAMGPGHVDVSADNLAFVPSSLQ
MEDSNSNKENMATLFTIWCTLCDKAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQ
SLMGAEVDVGLLLIGVWTRETIPVRTCFGPLIGQQSHSLEVADWTDKAASHIWKIYHNGV
LEFCIITTDETECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSRDIPPEHELFFYYSRD
YARQLGVPEHPDVHICHCGKECASYADFKAHLSSHIHSHLPSQGHSSSHGPGHGKERKWK
CSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLC
DKSFTQKAHLESHMVIHTGEKNLKCDYCEKLFMRRQDLKQHVLTHTQERQIKCPKCDKLF
LRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKICKGPTSSLSAPEEEEEDSEE
ELIDSLRTEDCRINNGVYSTGDALTGHK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtaccccagaatgaatgaaatgaacttgagtcctgtagggatggaccagctgacctcg
tcctctgtcggcaatgccctgcctgtctcagggagtcacctgggattggcagcatcaccc
actcacaacgccataccagcaccaggtttgccggttgcaattccaaacttgggcccctcc
ttgagttccttgccctctgctctgtctctgatgctcccaatgggtattggggatcgagga
gtgatgtgtggtataccagagagaaactacaccctacctccaccgccataccctcacctg
gagagcagctacttcagacacattctacctggtatcttatcttatttggctgacagacct
ccgcctcagtacatccatcccaacactataaatgttgatagcaatccagcattgtcagtg
cccagcaatccctcagccctggacccctaccagcccagtggaaccgtggggctggaacca
gggatcgtgcccatggactcccgcgcagtcaatgcgcacggtgctcaaaacatgcatcct
agtgacagccacgaggtagctctggatagtacaatcactatggagagtgtttcgagggta
accagccccatctctacggatgggatgacagaggagcttacaatggatgacgtagccagg
gatcattcgcagatcccaaatggctcccggagccatgaacctttggccgtagacacagtg
ggaagcaacttgacaccagacgcagtggggcacggcggtgtcatccccattcacagcagc
actttggaactccctgtccctgtcgtcatggagcccgaccacatcgctgggcgggtggca
gggatgtcagacagcacactaaatgactccattcataccgtggccatgagcaccaactct
gtgagcgtggcactctctacctcacacaacctcgcttccctggactcggtagccttgcac
gaagtgggcctcagcctcgagccagtggcggtgtcttccataaatcaggaagtagccatg
gggccgggtcacgtggatgtgtccgcagacaatcttgccttcgtaccgtcctctctgcaa
atggaagactccaattcaaacaaggagaacatggcaaccttgtttaccatatggtgcacg
ctgtgtgacaaggcgtatccatcagactgccctgaccatggacctgtcacctttgtccca
gacaccccaatagagagccgagccaggctttctctccctaagcagcttgtcctacggcag
tctctcatgggagctgaagtggatgttggtcttctactgataggtgtgtggacacgagaa
accattcctgtaagaacttgttttggacctctgattgggcagcagagccattctctggag
gtggctgactggacagacaaagcagctagtcacatctggaagatctatcacaatggtgtc
ctagagttctgcatcattacaactgatgaaactgaatgtaactggatgatgtttgtacgc
aaagccaggaaccgggaagagcagaatctggtggcttatcctcacgatggaaaaatttac
ttttgcacctctcgggacatcccacctgagcacgagcttttcttttattacagtcgggat
tacgcacggcagcttggtgtccctgaacatccggacgtgcacatctgccactgtggaaag
gaatgcgcttcctatgcggacttcaaggcccatttgagcagccatattcacagccacctc
cccagtcagggccacagcagcagccacgggccaggccacggcaaggaaagaaagtggaag
tgctccatgtgcccccaggcttttatctccccttccaagctccacgtccacttcatgggg
cacatgggcatgaagccacacaagtgcgatttctgtagcaaagctttcagtgatcccagc
aacttacgcacgcacctcaagatacacacaggtcagaagaattatcggtgtaccctctgt
gacaaatcgttcacccagaaggctcacttggaatcacacatggtcatccacaccggggag
aagaatctgaagtgtgattactgcgaaaagctgttcatgcggaggcaggacctcaagcag
cacgtacttacccacacacaagaacggcagatcaagtgccccaagtgtgacaagctgttt
ctgaggacaaatcatctgaagaaacatctcaactcacatgaaggaaagagggactatgtc
tgtgaaaaatgcaccaaggcttatctaaccaaatatcacctcactcgccacttaaaaata
tgtaaaggccccacatccagtctgtcagcgccagaggaggaagaggaggattcagaggag
gaactgatagactcactgaggactgaggactgtaggattaacaatggagtctactcaact
ggtgatgccctcacgggacacaaatga
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