Lagopus muta (rock ptarmigan): 125699975
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Entry
125699975 CDS
T09141
Symbol
PWP1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmut03009
]
125699975 (PWP1)
Ribosome biogenesis [BR:
lmut03009
]
Eukaryotic type
90S particles
Other 90S particles
125699975 (PWP1)
Pre-60S particles
Other pre-60S particles
125699975 (PWP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_CAF1B_HIR1
EIF3I
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_Aladin
DUF4354
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
125699975
NCBI-ProteinID:
XP_048816039
LinkDB
All DBs
Position
1:complement(52529402..52542540)
Genome browser
AA seq
504 aa
AA seq
DB search
MSCPVTCAAWVRRGVAKETPDKVQLSREELRRLVGEARGRLREGSDGSDEEDQGQPADGM
DVAIADRAESPPDNEEQEESAEKLTDDELAEYDLDKYDEEEDGGDSKLGETLAGLAVYGS
NDQDPYITLKNTDQYEQEDFLIKPNDNLVLCGRVDKDYCSLEVHVYNHEEDSFYVHHDII
LPAYPLSLEWLNFDPNPEESSGNYVAVGNMTPVIDIWDLDIVDCLEPVFSLGSKKEKKKK
KKGKKGSPQEGTMEGHADAVLDLSWNKQSRNVLASASADSTVILWDMSVGKPAASLTLHT
DKVQTLQFHPFETQTLISGSYDKSAVLYDCRSPQDNHRIWRFSGQVERVTWNHFSPCNFL
ASTEDGFVYCLDARSDKPLFTLKAHDEEVSGLQLSSQVKGCLVTSSADKYVKIWDILGGK
PSLIHSRDMKMGVLFCAACCPDFPFVFAFGGEREGLRVWDISSISAVNEVFGNRERLVLA
GANSVACSSLAGSSSNSSETAMES
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcccggtgacgtgcgccgcctgggtgcgccgcggcgttgccaaggagacgccg
gataaggtgcagctcagccgggaagagctgaggcgactcgtcggggaggcccgcggcagg
ttgcgggagggctctgatggcagcgatgaagaagatcagggccagccagcggatggcatg
gatgttgccattgcggacagggctgagtcgcctcctgacaatgaagagcaggaggaaagt
gctgaaaagctgactgatgatgaactggctgagtatgatttagacaagtatgatgaagag
gaagacggaggtgatagcaaacttggagagactttggctggtctggcagtttatggaagc
aatgatcaggatccttacatcactctgaaaaacactgatcaatatgaacaggaggacttt
ctgattaagcccaacgacaatcttgtcctttgtggcagggtcgataaagactactgcagt
ttggaggtccatgtttataatcacgaagaagactcattttacgtacatcatgatatcatc
ttgcctgcttatcctctgagtttggagtggctgaattttgatcccaaccccgaggagtca
tcaggaaattatgttgcagtaggtaacatgaccccagttattgatatctgggaccttgat
atagtggactgcctagaacctgtcttttctctcgggagcaagaaagagaaaaagaagaaa
aagaaagggaagaagggttcacctcaggaagggacaatggaaggacatgctgatgctgtt
ctcgatctctcgtggaataaacaaagcaggaatgttttagcaagtgcttctgctgacagt
actgtgattttgtgggatatgtctgtgggcaaaccagcagccagcctgacactacacaca
gacaaggtccagacattgcagtttcatccctttgaaactcagacccttatttccggatct
tacgataagtcagctgtgctgtacgattgcagaagcccacaagataaccatcgaatctgg
cggtttagtggtcaggttgaaagagtaacttggaatcatttttcaccttgtaatttctta
gcaagcacagaggatggctttgtgtactgcctggatgctcgctctgataagccgctgttt
actttgaaggctcatgacgaagaagtatcagggctacaactaagtagtcaggtcaaaggg
tgccttgtgacatcatctgctgacaaatatgtgaaaatttgggatatcctgggaggcaag
ccaagtttaatccattccagggatatgaaaatgggtgttctcttctgcgcagcttgctgc
cctgacttcccatttgtttttgcctttggaggagagcgagaagggctgcgtgtctgggat
ataagcagcatttctgcagtgaatgaagtttttggaaacagagagagacttgttctggct
ggtgcaaactctgtggcttgcagctccttggctggtagtagcagcaacagttcagagacg
gcgatggaatcgtga
DBGET
integrated database retrieval system
