Lagopus muta (rock ptarmigan): 125700242
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Entry
125700242 CDS
T09141
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125700242
Cell adhesion molecules [BR:
lmut04515
]
Cadherins
Protocadherins
125700242
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
125700242
NCBI-ProteinID:
XP_048816622
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Position
14:1390267..1392956
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AA seq
811 aa
AA seq
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MAAARQVLCVWALLGVARVRCEPIRYSVAEEGESGSPVGDVAEDAGLAPAQLSARRARIA
SPAGRQHFRLERGSGRLVVAERLDREEMCGRSRTCTLAFELLLADPLQFFPIEVSVEDIN
DHSPVFPDERLTFKILETSDPGSRFPVAAAQDLDIGSNDIQAYSIVPKNEFFTVSYQTHS
GSDNVLELVLQQPMDREEMPEMDFSLVAVDGGSPPRSGTTQIHIVVLDVNDNAPIFTQKL
YNAQILENVPEGSVVLRVLANDADVGINGDISYQFIQSVSQSQPAFIIDPSSGEIRTTKP
LDYEVAHKHDLSVRAVDGGDLSALSKVLVEVVDVNDNAPEIVVSSFSSPIPENAAPGTVV
ALFSVTDKDSGVNGEISCALQEQLSFSLRPAFKNYYELVTVSALDREQTARYTVVVTAAD
AGSPRLSSSHTFTVDIWDVNDNAPVFNQTSYTMYVHENNVPALLVGAVQARDADAGANGK
VSYSLVAADPPEREPCSCVSVNSESGAVFVLRPLDYEQLRQLEVVVSAADAGSPPLSSSV
VVRLLVVDENDNAPLVLHPSAQDGGRAWSEPVPAWAEAGDLVSKVVAVDADSGQNSWLSY
RLLRATEPGLFAVGAQSGEVRLRRPPTERDAAKQQLVVLVRDNGRPPLSATAALSVLLLH
GSRDAELPQQSPAAHDDDGSLTASLIVALVLVSLLFLVSAAAFAACKACKSKEPSSGHVL
YGPSGVQSCVADGAAAGTLPHAYCYELSLSTGSGNSEFQFLKPVLPSLPAQRCSPGVAGD
DAEHFPAVPVPVGDADVESPGMQSVGQFHGF
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgaggcaagtgctgtgtgtgtgggctttgctgggcgtggcgcgcgttcgc
tgcgagcccatccgctactccgtggccgaggagggcgagagcggctcgccggtgggcgac
gtggcggaggacgcggggctggccccggcgcagctctcggctcgccgggcgcgcatcgcc
tcgccggccggccggcagcactttcgcttagagcgcggcagcggccgcctcgtagtcgcc
gagcgcctcgatcgggaggagatgtgcggacgctcccgcacctgcacgctcgccttcgag
ctgctgctcgccgacccgctgcagttctttcccattgaggtgtccgtggaggacatcaat
gaccactcgccggtcttcccggatgaacggctgacctttaagattctggaaaccagcgac
ccgggctcccgtttccctgtggcagcagctcaggacctggacattggcagcaatgacatc
caggcttacagcatcgttcctaagaacgagttcttcactgtctcctatcagactcacagt
ggaagtgataatgttcttgaactggtattacaacagcctatggacagggaggagatgcca
gagatggatttctccctcgttgccgtggatgggggctctccaccgaggagtggaaccacc
caaatccacattgtagttctggatgtaaatgacaatgctcccatcttcacacagaagctg
tataatgcacagattttagaaaatgtccctgagggctctgtggtcctcagagtgttggcc
aacgatgcagatgtgggaattaatggtgacatttcctatcaattcattcaatctgtgagc
cagagccagccagcattcatcattgaccccagtagtggtgaaatccgtaccacgaagcct
ttggattacgaagttgcacacaaacacgatctcagtgtgcgggcagtggatggtggagat
ctgtcagcactctctaaagtgttggtggaggtggtggatgtgaacgacaacgcaccagag
atcgtggtcagttccttcagcagcccgatccctgagaatgcagcacccgggacagtggtc
gcactcttctctgtcaccgacaaggattccggtgtgaatggggagatcagctgtgccctg
caagaacagctgtccttctccctgcggccagcgtttaagaactactacgagctggtgacc
gtgagcgcgttggaccgggagcaaacggcacgttacacggtggttgtcacggccgcagat
gcagggtctcctcgcctgagcagcagccacacgttcaccgtggacatctgggacgtgaat
gacaacgcgcccgtcttcaaccagacgtcgtacaccatgtacgtgcacgagaacaacgtc
cccgcgctgctggtcggggccgtgcaggcaagggacgcggacgcgggagccaacggcaag
gtgagctattcgctggtggcggccgatccgcccgaacgagagccgtgctcgtgcgtgtcc
gtgaactccgagagcggagccgtgttcgtgctgcggccgctggactacgagcagctgagg
cagctggaggtggtggtgagcgctgcggacgcggggtcccctcccctgagcagcagcgtc
gtcgtccgcctgctggtggtggacgagaacgacaacgcgccgctggtgctgcaccccagc
gcgcaggacggcggccgtgcttggagcgagccggtgcccgcgtgggccgaagcgggggac
ctggtgagcaaagtggtggccgtggacgccgactcggggcagaactcgtggctttcgtac
cggctgctgagggccacggagccggggctgtttgccgtgggcgcgcaaagcggggaggtg
cggctgaggaggccgccgacggagagggacgcggcgaagcagcagctggtcgtgctggtg
cgggacaacgggcggccgccgctgtcggccaccgcggcgctcagcgtgctcctcctgcac
ggctcccgggacgccgagctgccgcagcagagccccgccgcgcacgacgacgacggctcc
ctcaccgcctccttgatcgtcgccttggtcttggtctcgctcctgttcctggtgtcggcg
gcggcctttgcggcgtgcaaggcgtgcaagagcaaggagccgagcagcgggcacgtgctg
tacggccccagcggcgtgcagagctgcgtggctgatggggccgctgccgggaccctgccc
cacgcctattgctacgagctcagcctcagcacgggctcgggcaacagcgagttccagttc
ctcaagcccgtgctgcccagcctgccggcgcagcgctgcagcccgggggtggccggcgac
gatgccgagcatttccctgctgtccctgtccccgtgggggatgctgatgtcgagagcccc
ggcatgcagtctgtgggacagtttcacggcttttaa
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