Lagopus muta (rock ptarmigan): 125700244
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Entry
125700244 CDS
T09141
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125700244
Cell adhesion molecules [BR:
lmut04515
]
Cadherins
Protocadherins
125700244
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
125700244
NCBI-ProteinID:
XP_048816623
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Position
14:1363098..1402827
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AA seq
811 aa
AA seq
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MAAARQVLCVWALLGVARVRCEPIRYSVAEEGESGSPVGDVAEDAGLAPAQLSARRARIA
SPAGRQHFRLERGSGRLVVAERLDREEMCGRSRTCTLAFELLLADPLQFFAIEVSVEDIN
DHSPVFPDERVTLKIPERGDPGSRFPVEAAQDLDIGSNDIQAYSIVPENEFFTVSYQNQS
ESEMHVDLVLQKPLDREEQPEMDFTLVATDGSYPPRSGTTQIHIIVLDVNDNAPIFTQKV
FSGHVLENAPKGFVVLRVMANDADDGINGDITYEFTQPGGQTYSDFTVDPRSGEIRVTRS
LDFETAQKYEFSLRAVDGGGLSAMCKVVVEVMDVNDNAPEIVVSSFSSPIPENAAPGTVV
ALFSVTDKDSGVNGEISCALQEQLSFSLRPAFRNYYELVTVSALDREQTARYTVVVTAAD
AGSPRLSSSHTFTVDIWDVNDNAPVFNQTSYTMYVHENNVPALLVGAVQARDADAGANGK
VSYSLVAADPPEREPCSCVSVNSESGAVFVLRPLDYEQLRQLEVVVSAADAGSPPLSSSV
VVRLLVVDENDNAPLVLHPSAQDGGRAWSEPVPAWAEAGDLVSKVVAVDADSGQNSWLSY
GLLRATEPGLFAVGAQSGEVRLRRPPTERDAAKQQLVVLVRDNGRPPLSATAALSVLLLH
GSRDAELPQQSPAAHDDDGSLTASLIVALVLVSLLFLVSAAAFAACKACKSKEPSSGHVL
YGPSGVQSCVADGAAAGTLPHAYCYELSLSTGSGNSEFQFLKPVLPSLPAQRCSTGVAGD
DAEHFPAAPVPVGDADVESPGMQSVGQFHGF
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgaggcaagtgctgtgtgtgtgggctttgctgggcgtggcgcgcgttcgc
tgcgagcccatccgctactccgtggccgaggagggcgagagcggctctccggtgggcgac
gtggcggaggacgcggggctggccccggcgcagctctcggctcgccgggcgcgcatcgcc
tcgccggccggccggcagcactttcgcttagagcgcggcagcggccgcctcgtagtcgcc
gagcgcctcgatcgggaggagatgtgcggacgctcccgcacctgcacgctcgccttcgag
ctgctgctcgccgacccgctgcagttctttgccattgaggtgtccgtggaggacatcaat
gaccactcgccggtcttcccggacgaacgggtgactttaaagatccctgagaggggcgac
ccaggctcccgtttcccagtggaggctgctcaggacctggacattggcagcaatgacatc
caggcttacagcatcgttcctgagaacgagttcttcactgtctcctatcagaatcaaagt
gagagcgagatgcatgtcgaccttgttttgcaaaagcctctggacagagaggagcagcca
gagatggatttcactctcgttgccacggatggaagttatccaccgaggagtggaaccacc
caaatccacatcatagttctggacgtaaacgacaatgctcccatcttcacacagaaggtg
ttcagtgggcatgttttggaaaatgctccaaaaggttttgtggttctcagagtgatggca
aatgatgctgatgatggaataaatggtgacattacatatgaatttacacaaccaggtgga
cagacgtattcagattttacagttgaccccaggagtggtgaaattcgagtcacgagaagt
ctggattttgagactgcgcagaaatatgaattcagtttgagggccgtggatggagggggc
ctttcagcaatgtgcaaggtagtggtggaggtgatggatgtgaatgacaacgcaccagag
atcgtggtcagttccttcagcagcccgatccctgagaatgcagcacccgggacagtggtc
gcactcttctctgtcaccgacaaggattccggtgtgaatggggagatcagctgtgccctg
caagaacagctgtccttctccctgcggccagcctttaggaactactacgagctggtgacc
gtgagcgcgttggaccgggagcaaacggcacgttacacggtggttgtcacggccgcagat
gcagggtctcctcgtctgagcagcagccacacgttcaccgtggacatctgggacgtgaat
gacaacgcgcccgtcttcaaccagacgtcgtacaccatgtacgtgcacgagaacaacgtc
cccgcgctgctggtcggggccgtgcaggcaagggacgcggacgcgggagccaacggcaag
gtgagctattcgctggtggcggccgatccgcccgaacgagagccgtgctcgtgcgtgtcc
gtgaactccgagagcggagccgtgttcgtgctgcggccgctggactacgagcagctgagg
cagctggaggtggtggtgagcgctgcggacgcggggtcccctcccctgagcagcagcgtc
gtcgtccgcctgctggtggtggacgagaacgacaacgcgccgctggtgctgcaccccagc
gcgcaggacggcggccgtgcttggagcgagccggtgcccgcgtgggccgaagcgggggac
ctggtgagcaaagtggtggccgtggacgccgactcggggcagaactcgtggctttcgtac
gggctgctgagggccacggagccggggctgtttgccgtgggcgcgcaaagcggggaggtg
cggctgaggaggccgccgacggagagggacgcggcgaagcagcagctggtcgtgctggtg
cgggacaacgggcggccgccgctgtcggccaccgcggcgctcagcgtgctcctcctgcac
ggctcccgggacgccgagctgccgcagcagagccccgccgcgcacgacgacgacggctcc
ctcaccgcctccttgatcgtcgccttggtcttggtctcgctcctgttcctggtgtcggcg
gcggcctttgcggcgtgcaaggcgtgcaagagcaaggagccgagcagcgggcacgtgctg
tacggccccagcggcgtgcagagctgcgtggctgatggggccgctgccgggaccctgccc
cacgcctattgctacgagctcagcctcagcacgggctcgggcaacagcgagttccagttc
ctcaagcccgtgctgcccagcctgccggcgcagcgctgcagcaccggggtggccggcgac
gatgccgagcatttccctgctgcccctgtccccgtgggggatgctgatgtcgagagcccc
ggcatgcagtctgtgggacagtttcacggcttttaa
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