Lagopus muta (rock ptarmigan): 125700247
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Entry
125700247 CDS
T09141
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125700247
Cell adhesion molecules [BR:
lmut04515
]
Cadherins
Protocadherins
125700247
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
125700247
NCBI-ProteinID:
XP_048816629
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Position
14:1409278..1413200
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AA seq
811 aa
AA seq
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MAAARQVLCVWALLGVARVRCEPIRYSVAEEGESGSPVGDVAEDAGLAPAQLSARRARIA
SPAGRQHFRLERGSGRLVVAERLDREEMCGRSRTCTLAFELLLADPLQFFPIEVSVEDIN
DHSPVFPDERVTFKILETSEPGSRFPVAAAQDLDIGSNDIQVYSIVPENEFFTVSYQNQS
ESEMHVDLVLQKPLDREEQPEMDFTLVATDGGSAPRSGTTQIHIIVLDVNDNSPIFTQKV
FSGHVLENAPKGFVVLRVVANDADDGINGDITYEFSQPGGQTYSDFTVDPRSGEIRVTRS
LDFETAQKYEFSLRAVDGGGLSAMCKVVVEVMDVNDNAPEIVVSSFSSPIPENAAPGTVV
ALFSVTDKDSGVNGEISCALAEQLSFSLRPAFRNYYELVTVSALDREQTARYTVVVTAAD
AGSPRLSSSHTFTVDIWDVNDNAPVFNQTSYTMYVHENNVPALLVGAVQARDADAGANGK
VSYSLVAADPPEREPCSCVSVNSESGAVFVLRPLDYEQLRQLEVVVSAADAGSPPLSSSV
VVRLLVVDENDNAPLVLHPSAQDGGRAWSEPVPAWAEAGDLVSKVVAVDADSGQNSWLSY
GLLRATEPGLFAVGAQSGEVRLRRPPTERDAAKQQLVVLVRDNGRPPLSATAALSVLLLH
GSRDAELPQQSPAAHDDDGSLTASLIVALVLVSLLFLVSAAAFAACKACKSKEPSSGHVL
YGPSGVQSCVADGAAAGTLPHAYCYELSLSTGSGNSEFQFLKPVLPSLPAQRCSPGVAGD
DAEHFPAVPVPVGDADVESPGMQSVGQFHGF
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgaggcaagtgctgtgtgtgtgggctttgctgggcgtggcgcgcgttcgc
tgcgagcccatccgctactccgtggccgaggagggcgagagcggctctccggtgggcgac
gtggcggaggacgcggggctggccccggcgcagctctcggctcgccgggcgcgcatcgcc
tcgccggccggccggcagcactttcgcttagagcgcggcagcggccgcctcgtagtcgcc
gagcgcctcgatcgggaggagatgtgcggacgctcccgcacctgcacgctcgccttcgag
ctgctgctcgccgacccgctgcagttctttcccattgaggtgtccgtggaggacatcaat
gaccactcgccggtcttccctgacgaacgggtgacctttaagattctggaaaccagcgaa
ccgggctcccgtttccctgtggcagcagctcaggacctggacattggcagcaatgacatc
caggtttacagcatcgttcctgagaacgagttcttcactgtctcctatcagaatcaaagt
gagagcgagatgcatgtcgaccttgttttgcaaaagcctctggacagagaggagcagcca
gagatggatttcactctcgttgccacggatgggggctctgcaccgaggagtggaaccacc
caaatccacatcatagttctggacgtaaacgacaattctcccatcttcacacagaaggtg
ttcagtgggcatgttttggaaaatgctccaaagggttttgtggttctcagagtggtggca
aatgatgctgatgatggaataaatggtgacattacatatgaattttcacaaccaggtgga
cagacgtattcagattttacagttgaccccaggagtggtgaaattcgagtcacgagaagt
ctggattttgagactgcgcagaaatatgaattcagtttgagggccgtggatggagggggc
ctttcagcaatgtgcaaggtagtggtggaggtgatggatgtgaatgacaacgcaccagag
atcgtggtcagttccttcagcagcccgatccctgagaatgcagcacccgggacagtggtc
gcactcttctctgtcaccgacaaggattccggtgtgaatggggagatcagctgtgccctg
gcagaacagctgtccttctccttgcggccagcgtttaggaactactacgagctggtgacc
gtgagcgcgttggaccgggagcaaacggcacgttacacggtggttgtcacggccgcagat
gcagggtctcctcgtctgagcagcagccacacgttcaccgtggacatctgggacgtgaat
gacaacgcgcccgtcttcaaccagacgtcgtacaccatgtacgtgcacgagaacaacgtc
cccgcgctgctggtcggggccgtgcaggcaagggacgcggacgcgggagccaacggcaag
gtgagctattcgctggtggcggccgatccgcccgaacgagagccgtgctcgtgcgtgtcc
gtgaactccgagagcggagccgtgttcgtgctgcggccgctggactacgagcagctgagg
cagctggaggtggtggtgagcgctgcggacgcggggtcccctcccctgagcagcagcgtc
gtcgtccgcctgctggtggtggacgagaacgacaacgcgccgctggtgctgcaccccagc
gcgcaggacggcggccgtgcttggagcgagccggtgcccgcgtgggccgaagcgggggac
ctggtgagcaaagtggtggccgtggacgccgactcggggcagaactcgtggctttcgtac
gggctgctgagggccacggagccggggctgtttgccgtgggcgcgcaaagcggggaggtg
cggctgaggaggccgccgacggagagggacgcggcgaagcagcagctggtcgtgctggtg
cgggacaacgggcggccgccgctgtcggccaccgcggcgctcagcgtgctcctcctgcac
ggctcccgggacgccgagctgccgcagcagagccccgccgcgcacgacgacgacggctcc
ctcaccgcctccttgatcgtcgccttggtcttggtctcgctcctgttcctggtgtcggcg
gcggcctttgcggcgtgcaaggcgtgcaagagcaaggagccgagtagcgggcacgtgctg
tacggccccagcggcgtgcagagctgcgtggctgatggggccgctgccgggaccctgccc
cacgcctattgctacgagctcagcctcagcacgggctcgggcaacagcgagttccagttc
ctcaagcccgtgctgcccagcctgccggcgcagcgctgcagcccgggggtggccggcgac
gatgccgagcatttccctgctgtccctgtccccgtgggggatgctgatgtcgagagcccc
ggcatgcagtctgtgggacagtttcacggcttttaa
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