Lagopus muta (rock ptarmigan): 125700273
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Entry
125700273 CDS
T09141
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125700273 (SH3TC2)
Membrane trafficking [BR:
lmut04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
125700273 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_2
SH3_1
TPR_1
SNAP
SH3_9
TPR_2
Motif
Other DBs
NCBI-GeneID:
125700273
NCBI-ProteinID:
XP_048816658
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All DBs
Position
14:8299595..8315635
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AA seq
1366 aa
AA seq
DB search
MQEWMEGTGGAAGGASSTAAACRLGAGGDAGHMGCCLGAPWHQDLALGCTAEECESCCPC
SPLLLPHWDRLQHRAAERQGRWWWEKTMASGKAGASEPSSPAEAAEGSPEPSSVLLAAGE
GFPPEISLFFSIESRSSRCPNAQLQEAARRKLWALESDDRHVCALFKELSARLLCIQAQE
DRFLLTFKTLEEVWKFSTYLTLGYVGRCLEQLLFEQEYWLNCALVEDTEIRVSMDENRLA
TIYLGLLLQEGHFFSRAVPGACQPEREGEEGLKFCRNELVHVKNIGEDSKWEGMSLLTGQ
RSLVPVTALEPVPHPFYQWFLRNYAMSFGISKEISESTSQPIVKGKCTATVDHRGAAWDE
LSFSKGDSIEVIGFLLPGLPWFVGRSLSSGNIGFVPVQSVNAEACESLEKGLVFLSEEEN
LPLLRIPCNGGEQHFATLLGELARTDITSVYRLDGFEPTAMFPKAPSEAVLHGCKDTQLL
QSWEEINSLVTASTSEQSSPGSESAPATWEDVLLDKLNDFDDPKFFIDLNAGHMEDADVF
EPILTFLNQDSYMLCYQSLYDLSFSFLNSTFYGFSDEDELVLYLETSRNWAKRTHSVWAH
VRLCFLLGKLCMKKVKFSQARVYFEEAMSTLGRGLGDLPLLAALHVNLASIYLKQNMKSK
FFSLLGKMVALLVCLPGRSFSSEHELRVMMYVLREAIAVGNTPLEARVCFLIVKLFLQLG
KNDEVLPFIEHLQCLCTTSLSLDASAVPLDATPILSYLYDKKYLPNIALASARSFVPSGI
KGAPTPIWKAGFILQNVSKLLGSQLERSSIPALVCSYLKQALHFSCESRAVTTQRTLCTV
LSRMYLQHGVLDGAVCYAAQAVVFSRLIGEEEAFESSLSLGWMYLLSSQPGPAADIMGQL
LHSLHGTDSVTQGGAVHNLLAIALRGAGQVQEATENYIRALHKAKETGNKRNQAIALANL
GQLSQSCGASQLSELYLLQAAQLYAELQGSEELELESVHVLLWLAQAMVSRRRMEDGKLC
YELALVFALKWHNMRSQLHVTEALCHFYSQVCPSLQACITYHEHRVSLAQKLQDRELEGN
VQQTLSQLYQALGTPEALRQSLDCTKQSLRIFIDLEETGKAAEAWLQAGRLYYLMQEDEL
VEMYFQAAIETALKAENFSLAMDLYEKAGDNFFNGSRHRDRAVEFYRGGAVPLARKLQAI
ETELRLFNKLTELQIGLQGYEKALEFATLAARLSIRVGDQLQELVAFHRLATVYYFLQMY
EMAEDCYLKTLALHPPMLQCSGEALYYCKVYCHLGNLTLHKLKDEQDAEAYFLLALAAAI
ELGDVELQGLIGAKLANISRALQRPVDVPGCATYRARWLSEGGHVV
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagtggatggagggcactggaggagctgcaggtggtgccagcagcacagcagca
gcctgccggcttggggctggtggcgatgctggacacatgggctgctgcttgggggcccct
tggcaccaggacctggccctggggtgtacagctgaggagtgtgagtcctgctgtccctgc
tcgcccttgctcctgccacactgggaccgcctgcagcacagagcagccgagcgccaggga
cgatggtggtgggagaagaccatggcatcaggcaaggcaggagcgtcagagccaagcagc
ccagctgaggcagcagaaggctccccagagccctcctcagtgctgctggcagctggggag
ggctttccgccagagatctcactcttcttctccattgagagccgctcctcacggtgcccc
aatgcccagctgcaggaagcagccagaaggaagctgtgggccttggagagtgacgacaga
catgtctgtgctctgttcaaggagctatcagccaggctgctgtgcatacaggcacaggaa
gatcggttccttctcaccttcaaaaccctggaagaagtctggaagttttccacatattta
actttaggctatgtaggccgctgcttggagcagcttctctttgagcaggagtactggctg
aactgtgcacttgtggaggacacggagatcagagtgtccatggatgaaaatcgcttggcc
accatatatctgggtctgctgctccaggaaggtcactttttttccagagcagtgcctggt
gcatgccagccagaaagggagggagaggaaggcctgaagttctgcaggaatgagctggtc
catgtgaagaacattggagaggattccaaatgggaagggatgtccttgctgacaggccaa
cgaagcctggtgcctgtgactgccctagagccagtacctcacccattctaccagtggttc
ctgaggaattacgccatgagttttggcatctccaaggagatcagtgagtcaacctctcag
ccgattgtcaaaggcaagtgcacagccacagtggatcacagaggagcagcatgggatgaa
ctgagtttctccaagggagacagcatagaagtcattggcttcctcctcccaggactcccg
tggtttgtgggcagatctttaagcagtgggaacatcggctttgtcccagtgcaatccgta
aatgctgaggcttgtgaatctctagaaaagggattggtgtttctgagcgaagaagaaaac
ttgcctctcctgcgcatcccctgcaacggtggtgagcagcactttgccaccctcctcgga
gagctggcacgcactgacatcacttctgtgtaccgcctggatggttttgaacccacagcc
atgttcccgaaagcgccatcagaggctgttctccatggctgtaaggacacccagttgctc
cagtcctgggaggagataaacagcttggtcacagctagcacctcggagcagtccagccca
gggagtgagtcagcccctgctacatgggaagatgttctcctggacaagctgaatgatttt
gatgatcccaagttcttcattgacctgaatgctggacacatggaagatgctgatgtcttt
gaacccattctgaccttccttaaccaagacagttacatgctctgttatcaaagcctctat
gacctcagtttctcctttctcaactccactttttatggtttctctgatgaggatgaactg
gtcttgtaccttgagacatccaggaactgggccaagaggactcattcagtttgggcccat
gtcaggctctgtttcctcttgggtaagctctgtatgaaaaaagtcaagttctcccaggct
cgagtctattttgaggaagccatgagcaccctgggcaggggccttggggacctgcccctg
ctggctgccttgcacgtgaaccttgcttccatctacctgaaacagaacatgaagagcaag
ttcttctccttgctgggaaaaatggtggccttgcttgtctgcttgcccggccgctccttc
agctctgagcacgagctgagggtcatgatgtacgttctgagggaggccattgctgtgggg
aacactcctctggaagcacgggtctgcttccttattgtcaagctcttcctccagctggga
aaaaatgatgaagtactgccctttattgagcaccttcaatgtctctgcaccacttcactc
agcctggacgctagtgctgtgccgctggatgccacccccatcctgagctatctgtatgac
aagaagtacttgccaaacattgcactggcatctgccaggtcttttgttcccagtggcatc
aaaggggcaccaacgcccatttggaaagctggcttcatcctccagaatgtgtccaagctc
ctgggaagccagctggagaggagcagcatcccagccttggtgtgttcctacctcaagcaa
gcactgcacttctcctgtgagagcagagcagtgaccacccagaggactctgtgcactgtt
ttgtcccggatgtacctccagcacggtgtgctggacggggcggtgtgctatgcagcccag
gctgtggtcttcagcaggctgataggtgaggaggaggcttttgagtcctccctctctttg
gggtggatgtaccttctgagcagccaaccaggcccggccgcagacatcatggggcagctc
ctacattccctgcatgggacagacagtgtgactcaaggtggagcggtgcacaacctcctc
gccattgccctcagaggagcagggcaggtgcaggaggccacagagaactacatccgggca
ctgcacaaagccaaggagaccgggaacaagaggaatcaggctatcgccctggccaacctg
gggcagctgagccagtcgtgtggggcgagtcagctgtctgagctctacctgctgcaggct
gcccagctgtatgctgagctgcagggcagcgaggagctggaactggagtcggtgcatgtg
ctgctgtggctggcacaggccatggtcagcaggcggaggatggaagatggcaaactctgt
tatgaacttgcgctggtttttgccctgaagtggcacaacatgaggagtcagcttcatgtc
actgaggcactctgccatttctacagccaagtgtgccccagcctccaggcctgcattacc
taccacgagcaccgggtctccttggcacagaaactccaggacagagagctagaaggcaat
gtccagcagaccctcagccaactctatcaggctttgggcacccctgaggctttgagacag
tcgctggactgcaccaaacagagtctgaggatcttcattgaccttgaggagacaggcaag
gcagcagaggcctggctgcaggcaggaaggctgtactatctcatgcaggaagacgagctg
gtggaaatgtactttcaggcagctattgagactgctctgaaagctgagaacttctccttg
gccatggatctctatgaaaaagcaggcgataacttttttaatggcagccggcacagagat
cgagcagtggagttttacaggggtggtgcagtgcccttggccaggaagctgcaggccatt
gagacagagctgcggctcttcaataagctgacggagctgcagatcgggctgcagggctat
gagaaggcgctggagtttgccacgctggcagccaggctgagcatcagggtgggagatcaa
ttgcaagagctggttgcattccaccgcctggctacagtctactattttctgcagatgtat
gagatggctgaagattgctacctgaagacactcgccctgcacccccccatgctgcagtgc
tctggagaagccctgtactactgcaaggtgtattgccaccttggcaacctgaccctgcac
aagctgaaggatgaacaggacgcagaagcctacttcctcctggcccttgctgcagccatt
gagctgggagatgtggagttgcagggcctcattggtgccaagctggccaacatctccaga
gccctgcagcgacccgtggacgtgccaggctgtgccacgtaccgggccaggtggctgagt
gaaggaggccacgttgtctga
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