Lagopus muta (rock ptarmigan): 125700311
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Entry
125700311 CDS
T09141
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125700311
Cell adhesion molecules [BR:
lmut04515
]
Cadherins
Protocadherins
125700311
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
125700311
NCBI-ProteinID:
XP_048816780
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All DBs
Position
14:911574..917208
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AA seq
965 aa
AA seq
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MGTGASCGRGQLSLPSFLLLLLLLLLSLLAAPHSTGGQLRYAVPEELEHGAFVANLGEDL
GLDASTLSARRFRIVAGAGARQHLEVNLENGILFVNERIDREEVCETGGTCLLHLQLLVE
SPLELYRVEVEVLDINDHAPTFPWQEYVLEVAESAMLGARFPLESAQDPDVGTNSVHTYQ
LSPNGFFSLEVQTRSDASKFAELVLERALDREQQRTHRLLLTALDGGIPRRSGTAHVLVT
VLDANDNIPAFDQPSYGVSLPEDAPTGTLVIQLNATDLDEGPNGEIEYSFSGHAPPSVRE
LFRVEPRSGQVLLKGPLDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVT
LTSVSTPVQEDAPPGTVIAVISVLDRDSGDNGRVSCELSPSVPFELRSSFRNYYTLVTTE
PLDREAVSEYNISITARDMGSPALLTRSTLTVPVSDVNDNAPHFLQPSYSVYVMENNAPG
ASICSVSALDPDCQQNAYLSYSITDGHIHGMPVGTYVSINSDSGHMYALRSLDYEQIRSF
QIQVQAQDAGFPPLSANVTVHIFVLDQNDNAPVIVSPMPRNGSVATELVPRSAGPGYLVG
TVSAVDADAGLNSRLSYQLLQATDFTLFSLAPDTGELRTLRSFLEQDAARQRLVVQVRDG
GQPSLSATVSLLLSVVETMPQTLSDFSNFSLPPEASSSSPLTLYLLVSLGSISFTFLLAI
LILTVIRCRGMRYPWQGDGCCCCPRPRRSPDGLKTSNLAAQPGASTATHLDVPDGGPPGY
CYKLCLGPESAQSDFMFLKPCSLPRNNEKGPGNLPGKRTRPGQPLQGPKQIKQPNTDWLP
PSVQRPALKSSQSLEDVGEIRKALQKEHERLCTLVTPVSEFQKASAGTNSIWAPQYGPLY
PGHVPAPDYQHNVYIPGTPTLLSSKDGPLVPGRESKNSFSTFGKRKKMTTYYDMPDSVVI
NNDLK
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggggaccggggcaagttgcgggagggggcagctttcccttccctccttcctcctcctc
ctcctcctcctcctcctctccctcctggccgcgccgcactccacgggtgggcagctgcgc
tatgccgtgcccgaggagctggagcacggagccttcgtggccaacctcggcgaggacctg
gggctggacgcgtccacgctgtcggcgcggcggttccgcattgtggccggggccggggcg
aggcagcatctggaggtgaacctggagaacgggatcctctttgtgaatgagcggattgac
cgggaggaggtgtgcgaaacagggggcacctgcctgctccacctgcagctgctcgtcgag
agccccctggagctgtaccgtgtggaagtggaggtgctggacatcaacgaccacgctccc
accttcccctggcaggaatacgtgctcgaggtggctgagtccgccatgctgggtgcccgc
ttcccgctcgagagcgcccaggatcccgacgtgggcaccaactctgtgcacacctaccag
ctcagccccaatggcttcttctcgctcgaggtgcagacacgcagcgatgccagcaagttt
gcagagctggtgctggagcgcgccctagaccgtgagcagcaacgcacgcaccggctgctg
ctcaccgcgctcgacggtggcatccccaggcgctctggcacagcccacgtcctcgtcacc
gtgctggacgccaacgacaatatccccgcctttgaccaaccctcgtacggagtgagcctg
cctgaggatgcccccactggcaccttggtcatccagctgaacgccacagacctggacgag
ggccccaatggggagatcgagtactccttcagtgggcacgcaccaccaagcgtccgagag
ctcttccgcgtggagccccgcagtgggcaggtactgctgaaaggccctctggactacgag
cgtgccagcctgcatgaactctacgtgcaagccaaggaccgtgggccttcggcggtggct
gtgcactgccgggtgcttgtgcatctcctcgatgtgaacgacaacgcgcccgaggtgacc
ctcacctcagtttccacgccggtgcaggaagatgccccaccgggcaccgtcatcgcagtc
atcagtgttctggaccgggactctggagacaacggccgtgtgagctgtgagctgagcccc
agtgtgccctttgagctccgctcctccttccgcaattactacacactggttaccacggag
ccactggaccgggaggcggtgtccgagtacaacatcagcatcacggcccgggacatggga
tccccagccctgctgactcgcagcaccctcaccgtgccggtgtccgatgtgaacgacaac
gccccgcacttcctgcagccctcctacagcgtctacgtgatggagaacaacgcgccaggg
gcctccatctgttccgtcagcgctctggatcccgactgccagcagaacgcctacttgtcc
tactccatcaccgatgggcacatccatggcatgcccgtgggcacctacgtgtccatcaac
tcagacagcgggcacatgtatgccctacgctcccttgattatgagcagatccgcagcttc
cagatccaggtgcaagcgcaggatgcgggcttccccccgctcagtgccaatgtcaccgtg
cacatcttcgtgctggaccagaatgacaacgctcccgtcatcgtgtcccccatgccgcgc
aatggctctgtggccaccgagctggtgccacgctccgctgggcctggctacctggtgggc
acagtgtcagcagtggatgcagatgcagggctgaactcccgcctgtcataccagctgctc
caggccaccgacttcacattgttcagcctggcacctgacactggtgaactgcgcaccctc
cgctccttcctggagcaggatgcggcccggcagcgcctggtggtgcaggtgagggatgga
gggcagccatcgctctcagccactgtgtccctcctgctttctgtggtggagacaatgcca
cagactctctctgacttcagcaacttcagcctccccccagaagcctcctcctcctctcca
cttaccctctacctcctggtgtccctgggctccatctccttcaccttcctgctggccatc
ctcatcctcacagtcatccggtgccgtggcatgcgatacccatggcagggtgatggctgc
tgctgctgtccccggcccaggcgctctcctgacggtctcaagacatccaacctggcagca
cagcctggtgccagcacggccacccacctcgatgtgcctgatggtggtcccccaggctac
tgctacaagctgtgcctcgggccagagtctgcccagagcgacttcatgttcctcaagccc
tgcagcctgccccgcaacaacgagaaaggtcctgggaatctgcctgggaagcggacccgg
ccagggcagcccctccaaggccccaagcagataaagcagcccaacacagactggctgccc
cccagcgtgcaacggcctgcactgaagagctcccagagcctggaggatgtgggggaaatc
cgcaaagccctgcagaaggagcacgagaggctgtgcacgctggtgaccccggtctctgag
tttcagaaggcctcagcgggcactaacagcatctgggcaccccagtatggccccctgtac
cctgggcacgtcccagccccagattaccagcacaacgtctacatccccggcaccccaact
ctgctttccagtaaagatggccccctggttccaggccgggagagcaagaacagcttttcc
acctttggcaagaggaagaaaatgacgacgtactacgatatgcctgacagtgtggttatc
aacaatgacctgaaatag
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