Lagopus muta (rock ptarmigan): 125700331
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Entry
125700331 CDS
T09141
Symbol
EBF1
Name
(RefSeq) transcription factor COE1 isoform X1
KO
K09103
early B-cell factor
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125700331 (EBF1)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
125700331 (EBF1)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
125700331
NCBI-ProteinID:
XP_048816814
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Position
14:10363680..10632396
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AA seq
604 aa
AA seq
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MFGIQESIQRSGSSMKEEPLGAGMNAVRTWMQGAGVLDASTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHN
QLPALANTSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQT
NYNSVTTSMNGYGNAGMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSG
IFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQDQSFVDSSKYSTAGSLQG
LAFS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatccaggaaagcatccagcggagcgggagcagcatgaaggaggagcccctc
ggcgcggggatgaacgcggtgcggacgtggatgcagggagcgggcgtcctggacgccagc
acggccgcgcagagcggagtgggtctggcccgggctcacttcgagaagcagcctccttcc
aacctgaggaagtccaactttttccacttcgtcctggctctgtatgaccggcaggggcag
cccgtggagatcgagcgcaccgccttcgtgggcttcgtggagaaggagaaggaagctaac
agcgaaaagaccaacaacgggatccactaccgcctgcagctgctctacagcaatgggatc
aggacggaacaggatttctacgttcgcctcatcgactccatgaccaagcaggcgatagta
tatgaaggccaagacaagaaccccgaaatgtgccgagttctgctcacgcatgaaataatg
tgcagccgctgttgtgacaagaaaagctgtggcaacagaaatgagactccatcagatcca
gtgataattgacaggttcttcttgaaattttttctcaaatgtaaccaaaattgtctaaaa
aatgcaggaaaccctcgagacatgcgacgatttcaggttgtggtgtctacaacagtcaat
gttgatggccatgtgttggcagtgtcggacaatatgtttgtgcacaacaattccaagcat
gggcggagagctcgaagactcgatccttcggaaggtacgccttcttatctggaacatgca
gctacaccatgtatcaaagccatcagtccaagtgaaggatggactacaggaggtgccact
gtcatcatcataggagacaatttctttgatgggttacaggtcatcttcggcaccatgctg
gtttggagtgagctgattactcctcatgccatccgcgtacagacacctccccgacatatc
ccaggggttgtagaagtcacattgtcctacaagtctaagcagttttgcaagggaacgcct
ggaagattcatttacacagctctgaatgaacccaccattgactatggtttccaaaggtta
cagaaggttatcccccggcaccctggtgaccctgaacgcttgccaaaggaagtaatactt
aagagggctgctgatttagtagaagcactctacggtatgccacataataaccaggaaata
atcctgaaaagagcagcagacatcgcggaagcactctacagtgtccctcgcaatcataac
cagctccccgcccttgctaacacgtcagtccatgcaggaatgatgggagtgaattccttt
agtggtcaactagctgtcaacgtatctgaagcctcacaggccaccaatcagggttttact
cgcaactcaagcagcgtgtcacctcacggctatgtgccaagcaccacccctcagcagaca
aattacaactctgtcacaacaagcatgaatggctatgggaatgctggaatgtcaaattta
ggtggttctccaaccttcctgaatggatctgctgccaattctccctatgccattgtgcca
tcaagtccaacaatggcctcctccactagcctcccctccaactgtagcagttcgtctggg
attttctcgttctcaccagccaacatggtctcagcagtgaaacagaagagtgcttttgcg
cctgtcgtgagaccgcaaacttctcctcctcccacctgcaccagcaccaatggcaatagc
ctgcaagaccagtcttttgtggactctagcaagtactccactgcagggtctctccagggg
ctggccttctcctga
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