KEGG   Lagopus muta (rock ptarmigan): 125700480
Entry
125700480         CDS       T09141                                 
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
  KO
K09444  interferon regulatory factor 1
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    125700480 (IRF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lmut03000]
    125700480 (IRF1)
Transcription factors [BR:lmut03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    125700480 (IRF1)
SSDB
Motif
Pfam: IRF
Other DBs
NCBI-GeneID: 125700480
NCBI-ProteinID: XP_048817088
LinkDB
Position
14:complement(16559442..16564961)
AA seq 312 aa
MPVSRMRMRPWLEMQINSNQIPGLIWINKDKMIFQIPWKHAAKHGWDIEKDACLFRSWAI
HTGRYKVGEKDPDPKTWKANFRCAMNSLPDIEEVKDKSINKGSSAVRVYRMLPPLTKDQK
KERKSKSSREARNKSKRKLHEDMRTEESAERLTSTPLPDDHSSYTTHDYTGQEVEVENTS
ITLDLSSCEVSGSLTDWRMSNEIAMADSTNDLYQLQVSPLGSSSEVVDEDEDEMKPHMMK
PFEPAQDWHTTSVEGKGFFTNEPGTQTMCSTFGCEIDMSSGELEFHMLDQKSSLEFSWLD
TVRPMQAISCSL
NT seq 939 nt   +upstreamnt  +downstreamnt
atgcctgtctcaaggatgcgcatgagaccctggttggaaatgcagattaattccaatcaa
ataccggggctgatctggatcaacaaggataagatgatatttcagatcccatggaaacat
gcagctaagcatggctgggacatagagaaggacgcctgcctcttccggagctgggccatc
catacaggaagatataaagtaggtgagaaggaccctgacccaaaaacctggaaggcaaac
ttccgctgcgccatgaattcactgcccgacattgaagaagtgaaggacaaaagcatcaac
aaaggctccagcgctgtccgtgtgtacaggatgctcccacccctgacaaaggaccagaag
aaggaaaggaagtcaaagtcttcaagggaagcaagaaacaagagcaagagaaagctgcac
gaggatatgaggacggaggagtcagcagaacgactaaccagcacccctctgcccgatgac
cacagcagctacaccactcacgactacacggggcaggaagtggaggtggagaacacgtcc
atcaccttagacctctcgtcctgtgaggtgagcggctccctgaccgactggaggatgtcg
aatgaaatcgccatggctgacagcaccaacgacctctaccagctccaggtgtcccctctg
ggttcgtcctcagaagttgtggatgaagatgaggatgaaatgaaaccacacatgatgaag
ccatttgaacctgcccaggactggcacacaaccagcgttgaggggaagggcttcttcacc
aacgagccgggcacgcagaccatgtgcagcacgtttggctgcgagatcgacatgtcttca
ggggagttggagttccacatgctggaccagaagagcagcctggaattctcctggctggac
accgtcagacccatgcaggccatctcctgcagcctgtaa

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