Lagopus muta (rock ptarmigan): 125700545
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Entry
125700545 CDS
T09141
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmut02000
]
125700545 (TMC5)
03037 Cilium and associated proteins [BR:
lmut03037
]
125700545 (TMC5)
Transporters [BR:
lmut02000
]
Other transporters
Pores ion channels [TC:
1
]
125700545 (TMC5)
Cilium and associated proteins [BR:
lmut03037
]
Other cilia and associated proteins
Stereociliary proteins
125700545 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
125700545
NCBI-ProteinID:
XP_048817267
LinkDB
All DBs
Position
15:complement(6797636..6822798)
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AA seq
886 aa
AA seq
DB search
MSYHYNEAFENPAYHFSETLEVDRSRNSEGNQFSHRNPYDSLSYSYQGEHRGRRQNYPPA
IPMASLRHNSEYSESLPMASLRHNSEYSESLPRVQVLSRSPYGRSQDNLSFEPEPELAYS
PRSAFGPLDDPYTHRFSSASEGSFVRRRNRRPSDTVTFATLSQATPECRGEEKLVDSLAS
MSKRERIKAIQKMPETMKRKREIRNKVLTEISKKSGGCGTQCGCCKHCLHRAKVSFRRFR
NTLSEYFQRLNFWHKTLKSIGGEFGTSVLSYFMFLKWLLNFNIFSFLINFGFITIPQFVT
AEPNNLSFTGLELLTGAGYFQQTVLYYGFYTNATISQTKNGASYNMQLAYIFTVGIYFVI
CLLILVFSMAKSFCRNFLTPQMYSGNASKLLCTWDFNITNEKAVKLKQKNLSTQIKEDLA
EENKEALSFTVTERIVRILIHLGSWAASLGTAVAACAGVYFLSINNLELFMKGNKNELES
QAAMLVLPIITSLLNVFIPFFYSWLGNLEKFQNPKRKIYVAIARTIILKISIIGILCYYW
LNVVAVSESQCWETLIGQDIYRLVLVDFIFCLLGSFFGEFLRRIIGTTVCVSLGVPEFDI
GRSVLDLIYAQTLTWIGILFSPLLPGIQMISFSIVFYVKKVSLMRNCQPPRKAWRAAQMT
TFFMFILFFPSLIGVLSVIAVTVWRLKPSKECGPFRGLPSIYTAISEWVKILENYIDSKW
VAWVYYNLIASELFFFILSVIIIVIAYLFWQIIRGRRTMAKLLREQIVNAGKDKRFLLEK
LQMLQRTQNPFAPRGQEQQRTSSLSHSSMPPAQQESNYPRRTFDRNQNASYNEYPYSAGI
SRRTGFPSDWETPQPSSSSGMSEAVALALRARQAALWEDLNDNSHL
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccattacaatgaagcctttgaaaatccagcctaccacttctcagagacactg
gaagttgataggagcaggaattctgaagggaatcagttctctcaccgaaacccttacgat
tctctgtcgtatagttaccaaggagagcacagaggaagaagacaaaattatcctccagcc
ataccaatggcttctctgagacacaactctgaatacagtgaaagtttaccaatggcttct
ctgagacacaactctgaatacagtgaaagtttaccaagagttcaagtcctgagcagaagt
ccatatggcagatcccaggataatctttcctttgagcctgagccagaattggcctacagc
ccacgttctgccttcggtcctctggatgacccctatactcacagattttccagtgcatca
gaaggtagctttgttcggagacgcaacagaaggccatctgacactgtgacatttgcaacc
ctgtctcaagcaactccagagtgcagaggagaggaaaaattagttgacagtcttgcaagc
atgtccaagcgtgaaaggattaaagcgatccagaaaatgccagaaaccatgaaaagaaag
agagagatcaggaataaagttctcacagaaatctcaaagaaatcagggggctgtggtact
cagtgtggctgctgtaagcactgtctgcacagagcaaaagtgtcatttcggcgatttaga
aataccttgtcagaatattttcagcgactgaatttctggcacaagactctgaagagcatt
ggtggagagtttggaacaagtgttctttcttattttatgtttttgaaatggctgctgaat
ttcaacatcttctcattcctcataaactttggtttcatcacaatccctcagtttgttaca
gcagaaccaaataacctttcattcacgggtctggagctgctcactggagctggttatttt
caacaaacagtactctactatggcttttacaccaatgctacaatcagtcaaacgaagaat
ggtgcatcttataacatgcagctggcctatattttcactgttggaatatattttgtcatc
tgtttgcttatcttggtgttcagcatggcaaaatccttctgcagaaactttcttacccct
cagatgtactctggcaatgcaagcaaacttctctgcacttgggacttcaacataactaat
gaaaaagctgtgaagttgaaacaaaagaatctcagcacacagataaaggaggacctcgct
gaagaaaacaaagaagctctaagttttactgtaacagagagaattgttcgtattcttatc
catcttgggtcatgggctgcttccttgggaacagcagtagctgcttgtgctggtgtttac
ttcctctccattaataatctagagctctttatgaaagggaataaaaatgaactggaaagc
caagctgccatgttggtgctacccattattacatccctcctcaatgtgttcatcccattc
ttctactcatggcttggaaacctggagaaatttcagaatcccaaacgcaagatatatgtt
gctattgccagaactataatcctgaaaatatccattattggaatactgtgctactactgg
cttaacgttgtggctgtgtcggagtcacagtgctgggaaacactgattggccaagatatc
tatcgtcttgtgttggttgacttcatattttgtttgcttggctcattctttggagaattt
ttgcgaagaattattgggactacagtctgtgtgagcctgggggtgccagagtttgatatt
ggacgaagtgttttagatttgatctatgctcagacattgacctggatcggtattctcttc
tcacctctgctgcctggtatccagatgatatcattttctatagtattttatgtgaaaaag
gtcagtctgatgaggaattgccaacctcctcgcaaagcctggagagctgctcaaatgaca
acgttcttcatgttcattctgtttttcccttccctcattggagtcctgtctgtcattgca
gtcactgtctggaggttgaaaccttcaaaagaatgtggtcctttccgaggtctgccttct
atatacacagcaatctctgagtgggtaaaaatactggaaaattacattgattcaaaatgg
gtagcatgggtctactacaacttaatagcaagtgaacttttcttcttcatcctctccgtc
attatcatagttattgcttaccttttctggcaaataataagaggaagaagaaccatggcc
aagctcttacgtgagcaaattgttaatgcaggaaaagacaaaaggtttttacttgaaaaa
ctacagatgctacagagaacacagaacccatttgcaccaagaggacaggagcagcagaga
acttcttctttatcccactcatccatgccacctgcccagcaagaatcaaactatccacga
aggacatttgacagaaatcaaaatgcatcctacaatgagtatccttactctgctgggatc
tcgaggaggactggcttcccatctgattgggaaacaccccagccgagcagcagctcaggg
atgtctgaggcagtggcactggctctgcgtgcgaggcaggcggctctgtgggaagattta
aatgacaacagccatctttga
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