Lagopus muta (rock ptarmigan): 125700546
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Entry
125700546 CDS
T09141
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125700546 (AFF3)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125700546 (AFF3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
MACPF
Motif
Other DBs
NCBI-GeneID:
125700546
NCBI-ProteinID:
XP_048817275
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All DBs
Position
1:complement(131579261..131903053)
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AA seq
1237 aa
AA seq
DB search
MDSFDLALLQEWDLDSLCVYEPDRNVLRRKEWERRNQEAQQEDGTFNTSYSLFSEPYKTN
KGDELSNRIQNTLGNYDEMKDLLTDRSNQSHLVGVPKPGVPQTPLPKPDELLIADSRPPP
PPSISNTSSAPAALPAQQSKSTTMGWQKAGHNAASEGQQRASKHGHRSLESHKGDFKLAN
QKSSLEKLKRYASSPTSSSSNAAQQSSLRATLGDSVSRVQQPAKLNCGSEGGAQVQERPS
KHSSGHCVQNFPPSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKLLTETTKLYRGVP
SNKPDSARTKSKITKFNIPKQEEDSGTGDNSCIEEILREMTHSWPPPLSAIHTPGKAEQS
KFPFPNKESQQGSTGHSNTRKSDVEPKSPEKGTTHTSMLEDDLKLSSDEEENDQQAAQRS
ALRVLSDSSLVGPQSSTRAPGLSSKGSSSSSSSESESSSESDSESESSSSESDGSKPSHY
SSPEPEPPSSNKWQLDKWLNKVTPHKAPILTPHDGSALEAHPYYGHLKAERQEDEKTPAP
GPTEHRGGESRTAAASTAATVGDGPRPRTANKAPGSKGGRQKSPPAADGGPPRRAAGKKA
PRRAERTAAGDGSHCRGAEEPAGSHGFLESAGSEAPRARPGASVGGAGCRAGHRREPRSA
AVGEKRRARGPSKTAPKSKEFIETESSSSSSSSESGSESEREERPLPKAQAAAGAEPHAK
DLGTGAASKAHGGCSAFGSINARTNSEIAKELEEQFYTLVPFGRNELLSPLKDSDEVKSL
WVNIDLALLSRIPERLPEEPLAMSAGTNQAASIPQGSSAELPAEKGLPKSRRKRKCENEE
EYRDIKKTHLERENSSRLAASAHSIATANHCNVNENSLALPINKNEKVLRSPVSPLSDAS
KHKYSNDDLTSSSRPNGSSLLPSISSSKKHKGEIQSQPHLGDFNKAVHTNSENVLLCNKP
QTQTEPWSPLSSAPRDCRRTKLIFDDMPRNADYFMQEAKRKKHKADAMVEKFGKALNYAE
AALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAVRLKTHSGPNATPEDKQLAALCYR
CLALLYWRMFRLKRDHAVKYSKALIEYFKNSSKAAQNPSSWGNSGKSTGTPSPMSPSPSP
VSSVGSQGSTGPPSSSPIISIPQRIHQMAANHVSITNSILHSYDYWEMADNLAKENREFF
NDLDALMGPITLHSSMEHLVQYTQQGLHWVRNSTHLS
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagctctgctccaggagtgggacctggactcgctgtgtgtctac
gagccggatagaaacgtgctgcgcaggaaagaatgggaaaggagaaatcaggaggcccag
caggaggatggcacatttaacaccagttactccctcttcagtgaaccgtacaagactaac
aagggggacgagctctctaatcgcatccagaatacactgggcaactatgatgaaatgaaa
gatttgttaactgacagatcaaatcagagccaccttgttggggttccaaaacctggggtt
cctcagacacctctccccaagcccgatgaacttcttatcgccgactcaagaccgccacct
cctccttccatttccaacacttcttccgcaccagcagccctacctgcgcagcagagcaaa
agtaccacaatgggctggcagaaggctgggcacaatgctgcttcagaaggtcagcagaga
gccagcaagcatggacaccgctcactggagtcccataagggtgacttcaaactggcaaac
caaaaatccagtctggagaaactgaaacgctatgcatctagtcccacctcctcgtcctcc
aatgctgcccagcaaagctcactgagagccacactaggtgacagtgtcagcagagtgcag
cagccagcaaagttaaattgtggctcagaaggaggagctcaagtgcaagagagaccctca
aagcacagcagtgggcactgtgtccagaacttcccaccatctcttgcttcgaagcccagt
ctggttcagcagaaaccaacggcttatgtaaggccaatggacggtcaagaccaggcccct
gatgagtctccaaagctgaagttattgactgagacgaccaagttgtacaggggagtgcct
tctaacaaacctgattcggccaggaccaagtcaaagataacgaagttcaacattcctaag
caagaagaggacagtggaacaggagataacagctgcattgaagaaatattgcgggagatg
acccattcatggcctccaccactgtcagctattcacacaccagggaaggcagagcaaagc
aagtttccctttccaaacaaggagtcacaacagggatctacaggacacagcaatacaaga
aaaagtgatgtagagccaaagagtccagagaaaggcacaactcatacatcaatgctagaa
gatgatctgaagttaagcagcgatgaagaggagaatgaccagcaggcagcacagagatct
gctctccgcgttctgtctgacagcagcctggtggggccgcagtccagcacccgagcccca
ggactctccagcaaggggtccagcagcagcagctccagtgagtccgagagcagctcagag
tctgactcagagagcgagagcagctccagcgagagtgacggcagcaagccctcacattac
tccagcccagagcctgagccaccctcatctaacaagtggcagctggacaagtggctgaat
aaagtcaccccacacaaagcacccatcctgaccccccatgacggttcggcccttgaagcc
cacccctactacggccacttgaaggcggagcggcaggaggacgagaagaccccggcccca
ggcccaactgagcaccgcggcggggagagccgcaccgccgccgcctccaccgccgccacc
gtcggggacgggccgcggcccaggaccgccaacaaagcaccgggcagcaagggaggacgc
cagaagtcaccccccgccgctgacggcgggccgcccaggagggcagcggggaagaaggca
ccgcgacgagccgagaggaccgccgccggagacggctcccactgccgtggggcagaggag
cccgccgggagccacggctttctggaaagcgccggcagcgaggcgcccagggcccggccc
ggtgcgagcgtcggcggtgcgggctgcagagcggggcatcgccgggagcctcgctcggcc
gcggtcggtgagaagcggcgggcccgggggccgagcaaaacggcgcccaaatccaaggag
ttcatagagaccgagtcctcgtcctcgtcgtcctcctccgagtcgggctccgagtcggag
cgggaggagcgcccgctgcccaaggcgcaggcggcggccggggccgagccgcatgccaag
gacttggggacgggagccgccagcaaagcccacggcggctgcagtgcctttggctccatt
aatgccaggactaatagtgaaatagcaaaggagctggaggaacagttttacaccctggtt
cctttcggtaggaatgagctcctgtctcctctgaaagacagtgatgaggtaaagtcgctg
tgggtcaacattgacttggctcttttgtccaggattccagagcgtttgcctgaagagccg
ctggcaatgagcgccggaacaaaccaggcagccagcatcccgcagggtagtagtgctgag
ctccctgcagagaagggcttaccgaaatctagaaggaaacgcaagtgtgagaatgaggaa
gagtacagagacatcaagaagactcatttagagcgagagaattcttcacgattagctgcc
tctgcccacagcatcgcaacagcaaatcactgcaatgtaaatgaaaatagtttggcacta
ccaataaataaaaatgagaaagtgcttcggtcacccgtctctcccctctctgatgcatca
aaacacaaatactccaacgatgatttaacttcctccagcagacctaatggcagcagtcta
ttaccttccatctcctccagcaaaaagcataagggtgaaatccagtcacagccacatctc
ggagacttcaataaagcagttcacaccaattcagaaaatgttcttctctgcaataagcca
cagacccaaacagagccttggtcacctctgtccagcgcacccagggactgcagaaggaca
aaacttatctttgatgatatgccacgcaatgcagattactttatgcaggaagctaaacgg
aagaaacataaagcagatgcgatggtggaaaagtttggaaaggcactgaattatgcagaa
gcagcactatcgtttattgagtgtggaaatgcaatggaacaaggcccaatggaatctaaa
tccccctatacaatgtattcagaaacagttgaactcatcaggtacgcagtgagactaaaa
acccactcaggccccaatgccacgccagaagacaagcagttggcagcactatgttaccgc
tgcctggctcttctgtactggaggatgttccgactcaagagagaccatgctgtcaagtat
tctaaagcgcttattgagtatttcaagaattcatcaaaagccgcccagaacccatcttct
tggggtaacagtggaaagagcacaggaactccatcgcccatgtcccctagcccttctcca
gtcagttctgtcggatcccaggggagcacagggcccccttcctcatctcctataatcagc
atcccccagcgcatccatcagatggccgccaaccacgtcagcatcaccaacagcatcctg
cacagctatgactactgggagatggctgacaacctggccaaggaaaatagagaatttttt
aacgacttggatgcattgatgggacctatcaccttgcacagcagtatggagcatttagtt
cagtacactcaacaaggacttcactgggtgcggaatagcactcacttgtcataa
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integrated database retrieval system
