Lagopus muta (rock ptarmigan): 125700614
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Entry
125700614 CDS
T09141
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03440
Homologous recombination
lmut03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125700614 (TOP3A)
03460 Fanconi anemia pathway
125700614 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmut03032
]
125700614 (TOP3A)
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125700614 (TOP3A)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
125700614 (TOP3A)
DNA replication proteins [BR:
lmut03032
]
Eukaryotic type
DNA Topoisomerases
125700614 (TOP3A)
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
125700614 (TOP3A)
FA (Fanconi anemia) pathway
125700614 (TOP3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
125700614
NCBI-ProteinID:
XP_048817506
LinkDB
All DBs
Position
15:10204128..10217015
Genome browser
AA seq
1078 aa
AA seq
DB search
MRVKNCLGGCRERDVEKGERIWSAALSSGPTALSGGTGPGERKQRYALVPWDLSQLPVMN
FQARLLASCGVRMLPQPWRSFSRAAEGPAVQRIRKVLCVAEKNDAARGIADLLSNSRMRR
REGFSKFNKIYEYDYQMFGQNVTVVMTSVSGHLLAHDFKLPFRKWHSCNPLALFDAEIEK
YCPENYVDIKRTLEREVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVFRARFSE
ITLHAVRRACENLTQPDQKTSDAVEVRQELDLRIGAAFTRFQTLRLRKIFPDILADQLIS
YGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEEGNVVFNWKRNRLFNHTACLVLY
HMCMEDPVATVVEVGSKPKSKWRPLPLDTVELEKLASRKLKINAKETMRIAEKLYTQGFI
SYPRTETNIFPKELNLSALVQHQTQDPSWGAFAQRILDQGGPTPRNGTKSDQAHPPIHPT
KYTANLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFIAQGLMILARNYLEV
YPYEKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDATHAE
HIETIKTRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKSLVLQQQVQKYKQVFIEAVARANKLDQALAQYFGEATEIAEQEEVYPAMPVSIRKCPQ
CNNDMVLKTKKNGGFYLSCMGYPACKTAVWFPDFVLDVAKDESICAVCKPHPVHRLKFKF
KRGSVPPTMPLEFVGCIGGCDEMLKELLDLRYSNRSSQSGQSASQQANQLQVNNSFNRAN
SDKRHVGGTTNMATGHLLYLSSTRAPRPAPSAAPDDGSNAVVCNCGNEAMLLTVRKEGPN
QGRQFYKCSANTCNFFLWSDQQSEDRSNVAPRGSAPPQAFGARGPANSQRPGGKRGPEHF
GSSNNSSSGGSTVCRCEQPAVTRTVQKDGPNKGRQFHTCSKPREQQCGFFQWADESVAPG
ASGDFSFNHFGSSGYSRELGSKAKRPSNLSQGATAKKPRTCSICHQPGHTKKTCPLDH
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttaaaaactgcctgggaggatgcagggagcgtgatgtggagaagggagaacgt
atctggagcgctgcgctcagctctgggcccacagccctcagtggggggaccggcccagga
gagaggaagcagcgctatgccttggtgccgtgggacctgtcacagttacctgtgatgaac
tttcaagccaggcttcttgctagctgtggggtcaggatgctgcctcagccttggcgcagc
ttttcacgggctgcggagggtccagcagtgcagaggatccggaaggtcctgtgtgtagct
gagaagaatgatgctgcccgaggaattgcagatctgctctccaacagcagaatgcggcgg
agagaagggttttccaagttcaacaagatctacgaatacgactaccagatgtttggccag
aacgttactgtggtgatgacatccgtgtcaggacacttgctggctcatgatttcaagctg
ccgtttcgcaaatggcatagctgtaaccctctagctctctttgatgctgaaatcgagaaa
tattgtcctgagaattatgtggatattaagagaaccctggaacgagaggtgcagcagtgc
caggctctggtcatctggaccgactgcgatcgagaaggagagaacatcggctttgagatc
attcatgtttgcaaagctgtaaagccaaacctccaggtgttccgagcacgtttttcagag
atcacacttcatgctgtcagaagggcctgtgagaatctcacccaaccagatcagaaaacc
agtgatgctgttgaagtcaggcaggaactggacctcaggataggtgctgctttcaccaga
ttccagaccctgaggctccggaagatcttccctgacattttggcagaccagctgatcagc
tatggcagttgccagttcccaactctggggttcgtagttgagcgcttcaaagccatccag
gcctttgtccctgaagccttctataaaatcaaagtgacacacgatcatgaagagggcaat
gtggtcttcaactggaagaggaaccggctctttaatcacacagcgtgcctggtcctttac
cacatgtgtatggaggatcctgttgccactgttgttgaggttggaagcaagccaaagagc
aaatggaggcccctgcccttggacacagtggaacttgagaagttggcttcccgcaaactg
aaaataaatgcaaaggaaaccatgagaatagcagaaaaactctatactcaagggttcatt
agctatccccgaacagagaccaacattttccccaaggagctgaacctctctgccttagta
cagcatcaaacacaggaccccagctggggagcatttgcacagaggatcttggatcagggt
gggccaactcctcggaatggaaccaaatcagatcaggctcaccctcccattcatcccaca
aaatacactgctaacctgcagggcaatgaacagagactatatgaattcatcgtgcgccat
tttttggcttgctgctctcaagatgccaagggacaagaaacaactgtggagattgacatt
gctaacgagcgattcattgctcaaggacttatgatcctggcccgaaattatctggaagtt
tatccttatgagaagtggagtgacaaggttatcccactgtatcagaaagggtctcgcttt
cagcccactacagtggagatggtggatggggaaaccagccctccattgctcctcacggaa
gcggatctcattgcactcatggagaaacatggcattgggactgatgccactcatgcagag
cacattgagacaattaagacacggatgtatgtggggctcacagcagatcagaggttcctc
ccaggccacctgggcatggggctggttgaaggctacgattccatgggctatgagatgtcc
aagcctgaccttcgagccgagctggaggctgatctgaagctgatctgcgagggaaagaaa
gacaaatctctagtgttgcaacagcaagtccaaaagtataaacaagtcttcattgaggct
gtggccagagccaacaagctggaccaggccctggctcagtatttcggagaagccacagaa
attgcagagcaagaggaagtctacccagcaatgcctgtttccattcggaagtgtccccag
tgcaacaatgacatggtcctgaagaccaagaagaatggcgggttctatctcagctgcatg
ggatatccagcttgtaaaactgctgtctggtttcctgattttgtgctggatgtggccaag
gacgagagcatctgtgctgtgtgtaaaccacatccagttcacagactgaagtttaaattt
aagagaggcagtgttccacccacgatgcccctggagtttgtcggctgcattggaggatgc
gatgagatgctgaaagagcttctggacctgaggtactcaaacagatcatcccaatccgga
cagtcagccagccagcaggccaaccagttgcaggtgaacaactcctttaacagagcaaac
agtgacaagaggcatgtaggaggtaccacaaacatggcaacaggacatctgctttacttg
agttccacaagagcacccaggcctgctccttcagctgctccagatgatggcagtaacgca
gtggtgtgcaactgtgggaacgaagccatgctgttaactgtgcgcaaagaagggcccaat
caaggcagacagttctacaaatgcagtgccaatacctgcaactttttcctctggtctgat
caacagtcagaggacagaagcaatgtggctccgcggggctctgcaccaccccaagccttt
ggggcaaggggccctgcaaattctcagagaccaggaggaaagagaggcccagaacacttt
ggaagcagcaacaactccagttcaggaggcagcacagtctgcaggtgtgagcagccagct
gtcacacgcacggtccaaaaagatggccctaacaaagggcggcagttccacacgtgctcc
aaacccagagagcagcagtgcggcttcttccagtgggctgatgaaagcgtggctccagga
gcttctggagatttctcttttaaccactttgggagcagtggatactcaagggagttggga
agtaaagctaagagaccaagcaatctctcccaaggagcaacagccaagaaaccacggacc
tgtagcatttgccaccagcctggccacactaagaaaacttgtcctctagatcactga
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