Lagopus muta (rock ptarmigan): 125700619
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Entry
125700619 CDS
T09141
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00260
Glycine, serine and threonine metabolism
lmut00630
Glyoxylate and dicarboxylate metabolism
lmut00670
One carbon pool by folate
lmut01100
Metabolic pathways
lmut01200
Carbon metabolism
lmut01230
Biosynthesis of amino acids
lmut01240
Biosynthesis of cofactors
lmut04981
Folate transport and metabolism
Module
lmut_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
125700619 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
125700619 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
125700619 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
125700619 (SHMT1)
Enzymes [BR:
lmut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
125700619 (SHMT1)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
125700619
NCBI-ProteinID:
XP_048817520
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Position
15:10189266..10194613
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AA seq
485 aa
AA seq
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MANVTEGAGSLPSAELWASHSKMLLEPLESNDPEVYNIIKKEKQRQRLGLELIASENFAS
CAVLEALGSCLNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAFRLDPQKWGVNVQPY
SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKT
GYIDYDRLEENARLFHPKLIIAGVSCYSRNLDYARMRQIADANSAYLMADMAHISGLVAA
GVVPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGTRSTDPKTGKETLYNLESLINQAVFP
GLQGGPHNHAIAGIAVALQQTMTPEFKAYQQQVVANCKTLAAALMELGYNIVTGGSDNHL
ILLDLRSRGTDGGRAERVLELCSIACNKNTCPGDVSALRPSGLRFGTPALTSRGFRQDDF
RMVAQYIHKGIELTLRVQKDMSPKATLKEFKEKLEEEKYRGELKALKEEVEAFAATFPLP
GLPVL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgtgacagagggtgctgggagcctccccagcgcagagctgtgggcctcccac
agtaagatgctactggagccacttgaaagcaatgaccctgaggtatacaacatcatcaag
aaggagaagcagcggcagaggctggggctggagctgattgcgtcagagaactttgcgagc
tgcgcagtcctggaggcactgggatcctgcttgaacaataaatactctgaaggctaccct
ggacagaggtactatggtgggaccgagtttgtagatgagctggaaaggctgtgccagaag
cgagccctgcaggcattccgcctcgatccccagaagtggggtgtcaacgtccagccctac
tcagggtcacctgctaattttgcggtgtacacggccctggtggagccccatggcagaatc
atggggctggacctgcctgatgggggtcatctaacccacgggttcatgacggacaagaag
aagatctctgccacctctgtcttcttcgagtccatgccctacaaggtgaatcccaagact
ggttacattgactacgaccgacttgaggagaatgcccgtctgttccaccccaagctgatt
atagcaggtgtcagttgttactcacgcaacctggactatgcccgcatgcgacagattgcc
gacgccaacagcgcctacctgatggccgacatggcccacatcagcgggctggtggccgcg
ggcgtcgtgccctcaccgtttgaacactgcgacgttgtctccaccaccacccacaagacc
ttgaggggctgcagggccggcatgatcttctatcgcaaaggcacccgcagcacggacccc
aagacaggaaaggaaacactctacaatctggagagcctcatcaaccaagcggtcttccct
gggctgcagggagggccacacaaccatgccatcgcagggattgctgtggcactgcagcag
accatgactcccgagttcaaggcttaccagcagcaggtggtggccaactgcaagacactg
gcagcagcactgatggagctgggctacaacattgtaacagggggctctgacaaccacctc
attctcctggacctgcgcagcagaggtacagacggtggccgggctgagcgggtgctggaa
ctctgctccatcgcctgcaacaagaacacatgccctggtgatgtcagtgccctccgtccc
agcggtctgcgtttcgggacaccagctctcacctcccgtggctttcggcaggatgatttc
cgcatggtggctcagtacatccacaaaggcatcgagctgacgctgcgcgtgcagaaggac
atgagccccaaggccacgttgaaggaattcaaggagaaactggaggaggaaaaataccgg
ggagagctaaaggcactgaaggaagaggtggaggcatttgcagcaaccttcccactccca
ggactgccagtcctgtaa
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