Lagopus muta (rock ptarmigan): 125700665
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Entry
125700665 CDS
T09141
Symbol
VPS35L
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125700665 (VPS35L)
Membrane trafficking [BR:
lmut04131
]
Protein recycling
Others
Retriever complex
125700665 (VPS35L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
DUF5667
Motif
Other DBs
NCBI-GeneID:
125700665
NCBI-ProteinID:
XP_048817652
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All DBs
Position
15:448814..502235
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AA seq
963 aa
AA seq
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MAAFPWHARSRNYASESDVCKVESVPLDFGDYHPLKPITVTESKTKKMSRKGSTSSTSSS
SSSSVTDPLSSVLDGTDPLSLFAAAADPLATTASMDGIRKKRDKDDSSALGSDFEQWSSK
RGEILARYTTTEKLSINLYMGSEKGKATTSGSAVSEKVRTRLEELDDLEEGSQKELLNLT
QQDYVNRIEELNQSLKDAWSSDQKVKALKIVIQCSKLLSDTTVIQFYPSKFVLITDILDT
FGKLVYERILSMCMDNRVSSSDNFSPETVNDTAKETCLNWFFKIASIRELIPRFYVEAAI
LKCNKFLSKTGISECLPRLTSVIRGIGDPLVAVYARAYLCRVGMEVAPQLKESLNKNFFD
FLLTFKQIHGDTVQNQLVVQCVEIPLYLTLYSPAIDWILQCIAYHAPEVLLTEMMERCKK
LGNNALLLNSVMSAFRAEFIAARSMDFIGMIKECDESGFPKHLLFRSLGLNLALADPPEN
DHLQILNEAWKVITKLKNPQDYINCAEVWVEYTCRHFTKREVNTVLADVIKHMTPDRAFE
DAYPQLQSIIQKVITYINDFSLLFSVEKFLPFLDMFQKESVRVEVCKCIMESFIKHQQES
TKDPVILNALLHICKTMHDSVNALTLEDEKRLLAALINGFIKMVSFGRDFEQQLSFYVEA
RSMFCNLEPVLVQLIHSVNQLAMETRKVMRGNHSRKTAAFVRACVAFCFITIPSLSSIFT
RLNLYLHSGQVALANQCLSQADAFFKAAVSLVPEVPKMISVDGKMRPSDAFLLEFLCNFF
STLLVVPDHPEQGVLFLVRGLLNVIQDYTWEDNSDDKVRIYTNVLHLLSAMTQETYIYHV
DKVDSNDTLYGGDSKFLAEISKLCETVIAQILDHLKTLGKEETLKRQSQLALYFFNTILA
HGDLRNNKLNQLSVNLWNLAQKHGFADTKTMVKTLEYMKRQSKQPDMSHFTDLALRLPLQ
SRT
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttcccctggcatgccaggtcaagaaattatgcttcagaatctgatgtctgc
aaagtagaatctgtgcccttggattttggtgactaccatccactgaaacccattacagtt
accgaatccaagaccaagaagatgagccggaaaggaagtacttcttctacctcttcttct
tcttctagttctgtgacggacccactgagcagtgtgttggatggtaccgatcccttgtca
ctctttgcagcggctgcagatcctttggctaccactgcttccatggatggcatacgaaag
aaacgggataaagatgacagctcagcactaggaagtgactttgaacagtggtcaagcaaa
cgtggtgaaatacttgctagatacacaacaactgagaagctctctattaatctgtacatg
ggatctgaaaaaggaaaagctacaactagtggctcagcagtttctgaaaaagtgaggaca
aggttggaagaactggatgatctggaagaggggtcacagaaagagctgttgaacttgact
cagcaggattacgtgaatcgaattgaagaactcaaccagtctttgaaggatgcttggtcc
tctgatcagaaagtaaaagctctgaaaatagtcattcagtgttcaaagcttctttcagac
accacagtaatccagttttatccaagtaaatttgtcttaataacagatatacttgatact
ttcggtaaactagtgtatgaaagaattctgtcaatgtgcatggacaatcgtgtctcttca
tcagataatttttctccagagactgttaatgatactgctaaagagacttgcttaaactgg
tttttcaagattgcttcaatcagggaactcattcctagattttacgtggaagcagcaata
ctgaagtgcaataaattcctatctaaaacggggatttcggagtgtctcccacgattaacg
tctgtgattagaggaattggagatccactggttgcagtctatgccagagcatacctttgc
agggttgggatggaagtggcaccacagctcaaagaaagcctcaacaaaaatttctttgac
tttcttctaacatttaaacaaattcatggggatacggttcagaatcaactggtagtacaa
tgtgtagaaattcctttgtatttaacgctctactctcctgctatagactggattttacag
tgtattgcataccatgctcctgaggttctgcttactgagatgatggagaggtgcaaaaaa
ctgggaaacaatgctctgctattaaattcagtaatgtcagccttcagagcagagtttatt
gctgcaaggtctatggacttcattggcatgattaaagagtgtgatgaatctggattccca
aagcatcttctctttcgctccttggggttaaacctggcattggctgatcctcctgaaaat
gatcaccttcaaatattgaatgaagcctggaaggttataacgaagctgaagaacccacag
gattacatcaactgtgctgaagtgtgggtggagtatacatgcagacacttcacgaagcga
gaagtcaatacagttttggcagatgttatcaaacacatgactcctgatagagcatttgaa
gatgcttacccacagttgcagtcaattattcagaaagttattacctacatcaatgatttc
tctctgcttttttcagtggagaaattcttgccatttctggatatgttccagaaggagagt
gtgagagtggaggtttgcaagtgcatcatggaatcttttattaagcatcagcaggaatct
acaaaggaccctgttatactcaatgctcttctgcatatctgcaagacgatgcatgactct
gtgaatgctctgacgcttgaggatgagaaaaggttgttagcagctttgataaatggattc
ataaaaatggtttcattcggtcgtgactttgaacagcaactgagtttctatgttgaagct
aggtctatgttttgcaatctggagcctgttctagtccagctaattcattctgtgaaccaa
ctagcaatggagacaagaaaggtgatgagaggaaatcattctagaaagactgctgcattt
gtcagggcttgtgttgccttctgcttcattacaattccatctctgagcagcatctttaca
cgtcttaatttgtatctgcactctggacaggttgctctggcaaatcagtgcctttcacaa
gctgatgcttttttcaaagctgcagtgagccttgttcctgaagtgccaaaaatgatcagt
gtagatggaaagatgcgaccttctgatgccttcctcttggaattcctttgtaacttcttt
tccacattattggttgttccagaccatccagaacaaggagtgttgtttcttgtgcgagga
ctactaaacgtgatccaggattatacttgggaggataacagcgatgacaaagtcaggatt
tacactaatgttttgcatctgctgtctgcaatgactcaagaaacatatatctaccatgta
gataaagtggattccaatgataccctgtatggtggagactccaagttcctggctgaaatc
agtaaactatgtgaaacagtaatagcacagattctggatcatctcaaaacccttggaaag
gaagagactctgaagcgacaaagccagctggcactctatttcttcaacacgattttagct
catggcgatctacgaaacaacaaactaaaccagctttcagtgaatctctggaatcttgcc
cagaaacatggctttgctgacaccaagacaatggtaaaaactctggaatacatgaagagg
caaagcaaacaacctgatatgagtcacttcacagacttggcccttcgccttcctctgcag
tccagaacctga
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