Lagopus muta (rock ptarmigan): 125700674
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Entry
125700674 CDS
T09141
Symbol
NLRC3
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lmut04054
]
125700674 (NLRC3)
Pattern recognition receptors [BR:
lmut04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125700674 (NLRC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
LRR_8
FISNA
LRR_4
DUF5474
LRR_12
Motif
Other DBs
NCBI-GeneID:
125700674
NCBI-ProteinID:
XP_048817695
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Position
15:complement(2576933..2593719)
Genome browser
AA seq
1093 aa
AA seq
DB search
MEEAWISRYRRQLMRSISPQFLEEIIGHLQRLDLLTVEEAGRAQEASSLPEQVRAVVDIL
AGKGSHASQSLQSFIETTNSQLYLHITVYEPMVQKHLESLQSFYENSLEIGSLQRLTNLL
LVEGLTDIQQKEHDILQMEMTKGLQNVSKSIPLEKLFLPLSKVSIPPRISVTTGVAGIGK
STLVKLFVGRWTKGLINRDIMFVLPLTFRELNTYEKLSAERLIRSSFPHITEPNCISTGA
ARTLLILDGLDEFKTPLDFSNTVACTDPKKEIQVDNLITNIIRGNLLQEASVWVTSRPAA
ASQIPGGLIDRMTEIRGFRAAEMKDFLDQMFLDNRDLSSQVLHHIKANRSLHIMCTVPGF
CRIYGSSIGYYLKNSAGQPQEMTVAPKTLSEIYSYYFKMALSSDWPERQRETLRIEQAVN
NSKKVMGSLGRLAFYGLLKRKHVFYEQDMKTYGIDLSLLHSSLCSRLLLKEDMQSSTAYY
FSHLTIQEFLAAIYYYTAAKRAIFDLFTESGMSWPKLGFLNHFKSAVQRSLQAEDGQLDI
FVRFLSGLLSPQVNQLLSGWLLVKDEHNSYRNQAISFLQGCLNTNYVISSQTVNTVHCLH
EIQHAEIAKAVEEAMKNESLAGMLTPVNCSALAYLLQVSDVCVEETNLSNCLTYNICKSL
LPQLLFCHSLRLDNNQFKDNVMELLGSVLSVKDCQIQRLSLAENQICNKGAKALARSLMV
NRSLTALDLRSNSIGSSGAKALADALKKNQVLLSLNLQHNVIKEEGATALAEALLTNRRL
ITLHLQKNSIGAHGAKKLAEALAQNCSLKELMLSSNSVGDSGSVALAEALKVNHSLQSLD
LQSNSISNTGVSALTAALCSNKGLIDLNLRENSISKEGGPAIAHALRTNCTLKKLDLAAN
LLHDEGGKAIALAMKENRALTSLHLQWNFIQTQAAVALAQALQSNGSLVSLDLQENAIGD
EGMAALAAALKVNTTLADLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNCISVAGAK
AMAKALKVNRSLRWLNLQENSLGMDGAICIATALRGNHGLTYVNLQGNRIGQSGAKMISD
AIRTNSPDCVVVV
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcttggatcagtcgctaccggaggcagctgatgaggtccatctcaccacag
ttcctggaggagatcatcggccacctgcagaggctggacctcctcacagtggaggaggct
ggccgggcgcaggaggcgagctccctgcccgagcaggtgagggccgtggtggacatcctg
gctggcaagggcagccatgcctcccagtccctgcagagcttcatcgagaccaccaattcc
cagctttacctccacatcactgtctatgaaccgatggtgcagaaacatctggagagcctc
caaagcttctatgagaacagcttggagataggttccctccagcgcctcacaaacctgctg
ctagtggagggcttgactgacatccagcagaaggagcacgacatcctgcagatggaaatg
accaaaggcctacaaaacgtatccaagagcatccctttagagaagctcttcttgcccctg
tccaaggtcagcatccccccgcggatctctgtgaccacgggggtggctgggatcggcaaa
agcacgctggtgaagctgtttgttggtcgctggacaaagggcttgatcaacagggacatc
atgttcgtgctgccactcaccttccgggagctcaacacctacgagaagctctctgccgag
aggctcatccgctcctcgttcccccacatcaccgaacccaactgcatctccacgggagct
gccaggacgctgctcatcctcgacggcttggatgagtttaagacccctttggatttttcc
aacacggttgcctgcaccgatcccaaaaaggagattcaagtggacaacctgatcaccaac
atcatacgaggcaacctgctacaggaggcttctgtctgggtcacctctcggcctgcagca
gccagccagatccccggcgggctcatagaccgcatgacggaaatacggggcttcagggct
gcagagatgaaagacttcttggaccagatgttccttgacaacagagacttatccagccag
gttctgcatcacatcaaggctaacagatctttgcacatcatgtgcacagttcctggattt
tgcaggatttacggctcttcaattggttattacctaaaaaacagcgccggtcaaccccaa
gaaatgacagttgctcctaagaccttgtcagaaatctattcctattattttaaaatggct
ttgagcagcgactggccagaaaggcagagagaaaccctcaggatcgagcaagctgtgaac
aacagcaagaaagtgatgggcagcttgggcaggctggccttctatgggctgctcaaacgg
aagcacgtgttctacgagcaggacatgaagacgtacggcatagacctctccttgctgcac
agcagtttgtgcagcagactcttactcaaagaggacatgcaatcctccacggcctattat
ttctcccacttaaccatacaggagtttttagcagctatttattattacaccgctgccaag
cgggcgatattcgacctcttcacggagagcgggatgtcctggcccaagctgggcttcctc
aaccacttcaagagcgccgttcagaggtcgctgcaggctgaggacgggcagctcgatatc
ttcgtgcggttcctctccgggctgctctctccgcaggtgaaccagctgctctccggctgg
ctcctggtgaaggatgagcataacagctacaggaaccaagccatcagcttcctgcagggc
tgcctcaacacaaactacgttatctcctcgcagacggtgaacaccgtgcactgcctgcac
gagattcagcacgcggagattgctaaggccgtggaggaagcgatgaagaacgagagcctg
gcagggatgctcacgccagtgaactgctctgccctggcgtacctcctgcaggtctctgac
gtctgcgtggaggagaccaacctctccaactgcctcacttacaacatctgcaagagcctg
ctcccccagctcctcttctgccacagcctcaggctggacaataaccagtttaaggacaac
gtgatggagctgctaggcagcgtgctgagcgtgaaggactgccagatccagaggctcagc
ctggcagaaaatcagatctgcaataaaggtgccaaagcactggccaggtcgctgatggtg
aacaggagcttgacagcgctggacctgcgaagcaactccatcggctcgtcgggagcgaaa
gcattggctgatgcactgaaaaaaaaccaagtcctgctctctctgaacctgcagcacaat
gtgatcaaggaggagggtgccacggccctggctgaggctctgctgaccaaccgcaggctg
ataaccctgcaccttcagaaaaactccatcggtgcccacggtgcaaagaagttagcagag
gcgctggcgcagaactgcagcctcaaggagctgatgctctccagcaactctgtaggagac
agcggctcggttgccttggctgaagccctgaaggtcaatcacagtctgcaaagcctcgat
ctgcagagtaattccatcagtaacactggggtcagtgcgctgacagcagctctctgctcc
aacaagggactcatcgacctcaatttgcgggagaattccatcagcaaggagggcggcccc
gccatcgcccatgccctgcgcaccaactgcaccctcaagaagctggacttggcagccaac
ctgctgcatgatgaaggtggcaaggccatcgctttggccatgaaggagaaccgggcactc
acatccctccacctgcagtggaacttcattcagacgcaagcagccgtggccctggcacaa
gcactgcagtccaatggcagcctggtcagccttgacttgcaggagaacgccattggggat
gagggaatggccgccctggctgctgcactgaaggtcaacactacgctggcagatctccat
ctccaggtagcttccatcagtgcagccggtgcccaagccctagcggaggccttgatggtc
aacaacagcttgcaggtcctggacttgaggggaaactgcatcagcgtggcaggggccaag
gcaatggccaaggcattgaaggtgaaccgcagcctccgctggctcaacctgcaggagaac
tccctaggcatggatggggccatctgcatcgccaccgcgctgaggggcaaccatggcctc
acctacgtcaacctgcaggggaaccgtatcggccagtcgggagccaagatgatctctgac
gccatccggaccaactcacctgactgcgtggtggtggtgtga
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