Lagopus muta (rock ptarmigan): 125700807
Help
Entry
125700807 CDS
T09141
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03015
mRNA surveillance pathway
lmut05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125700807 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125700807 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125700807 (CPSF4)
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125700807 (CPSF4)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125700807 (CPSF4)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125700807 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
125700807
NCBI-ProteinID:
XP_048817959
LinkDB
All DBs
Position
15:complement(10900309..10906676)
Genome browser
AA seq
243 aa
AA seq
DB search
MQELIASVDHIKFDLELAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPRFELPMGTTEQPP
LPQPAQTQQKRTPQVIGVMQSQNNNTGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFL
SGQ
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcatcgccagcgtggaccacatcaagttcgacctggagctggcggtggag
cagcagctgggggcgcagccgctgccctttcccggcatggacaaatcaggtgcagctgtc
tgtgaattttttttaaaagcggcatgtgggaaaggaggtatgtgcccattcagacacatc
agtggggaaaagactgttgtttgcaaacactggctacgaggactatgcaaaaagggagac
cagtgcgagtttctgcacgagtatgacatgaccaagatgcctgagtgttacttctactcc
aaatttggggaatgcagtaacaaagaatgtccattcttgcacatcgacccggaatctaag
atcaaagactgtccctggtatgacagaggcttctgtaaacacggtccactctgcagacac
cggcacactcgaagagtcatttgtgtgaattacctagtaggattctgtccagaagggcct
acctgtaaattcatgcaccctcgatttgaactacctatgggaaccacagagcaaccacca
ctgcctcagccagcacaaacacagcaaaagaggacaccccaagttattggagtcatgcaa
tctcaaaataacaacactgggaacagaggaccccggccattggaacaggtcacctgttac
aagtgtggtgaaaaaggtcattatgccaacagatgcaccaaaggacatctggcctttctc
agtggacagtga
DBGET
integrated database retrieval system
