Lagopus muta (rock ptarmigan): 125700994
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Entry
125700994 CDS
T09141
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04120
Ubiquitin mediated proteolysis
lmut04137
Mitophagy - animal
lmut04144
Endocytosis
lmut04340
Hedgehog signaling pathway
lmut04350
TGF-beta signaling pathway
lmut04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125700994 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125700994 (SMURF1)
04350 TGF-beta signaling pathway
125700994 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125700994 (SMURF1)
04137 Mitophagy - animal
125700994 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
125700994 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125700994 (SMURF1)
04121 Ubiquitin system [BR:
lmut04121
]
125700994 (SMURF1)
03029 Mitochondrial biogenesis [BR:
lmut03029
]
125700994 (SMURF1)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125700994 (SMURF1)
Membrane trafficking [BR:
lmut04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125700994 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
125700994 (SMURF1)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
HECT type E3
125700994 (SMURF1)
Mitochondrial biogenesis [BR:
lmut03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125700994 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
125700994
NCBI-ProteinID:
XP_048818359
LinkDB
All DBs
Position
15:10986495..11026710
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AA seq
737 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGFPIFRTVYEDSGPGRPLSCF
MEEPAPYTDTTGAAGGGNCRFVESPSQDQRLQAQRLRTPEVRGHVQTPQNRPHGHQSPDL
PEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRI
YFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQQPLPAPNEGSVEEGEELPAQRYERDLVQ
KLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDY
GGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAV
FHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHN
AFGRILQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLL
KPFDQKELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQF
VTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKL
YEKLLTAVEETCGFAVE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcccgggacgcgtcggaacggctccagcatcaagatccgcctcacagtatta
tgtgccaagaatcttgcaaagaaagatttcttcagacttcctgacccgtttgcaaaaata
gttgttgatgggtcaggtcagtgccactcaactgacactgtgaagaacacattggacccc
aaatggaaccagcattatgatctatatgttgggaagacagattccataaccatcagtgta
tggaaccataaaaaaatccacaagaaacagggagctggcttcctggggtgtgtgcgactc
ctctccaatgccatcagcaggctaaaagacaccggataccagcgtttggatctatgcaaa
ctaaatcccacggatactgatgctgtgcgaggccaaatagtggtcagtttacagacacgg
gacagaataggcaccggaggttctgtggtagattgcagagggcttttggagaatgaaggt
ttccccattttcagaacggtttatgaagattctggaccagggaggccactgagctgtttt
atggaagaaccagcaccctacacagacacgacaggggctgcaggtggaggcaattgtcgc
tttgtagagtctcctagtcaagatcagaggcttcaggcacagcgccttcggactcctgaa
gtcagaggtcatgtacagacacctcagaacagacctcatggtcaccagtctcctgaccta
cctgaaggctatgaacaaagaacaacggtacagggacaggtttattttttgcacacgcag
actggagttagcacgtggcatgaccctaggataccaagagaccttaacagtgtgaattgc
gatgagctgggacctctgcctccaggttgggaagttaggagcacggtttcaggaagaata
tattttgtagatcataacaacagaaccacgcaattcacagatccacgactacatcacatc
atgaatcatcaatgccagctaaaagagcccagccagcagcctctgccagctccaaacgag
gggtctgtggaagagggtgaagagttgcctgcacagagatatgaaagagacttggtgcaa
aagctgaaagttcttagacatgagctctcccttcagcaaccacaggcaggtcactgccga
attgaggtatccagagaggaaatatttgaggaatcctaccgtcagataatgaagatgagg
ccaaaggatttgaaaaagaggctcatggtaaaatttcgaggcgaggaaggcctggattat
ggaggagtagcaagagaatggttgtatttgctgtgccatgaaatgttgaatccatactat
ggactcttccagtactctacagataatatttacatgctgcaaatcaatccagattcctct
atcaaccctgaccacttgtcttatttccattttgttggtcggataatgggtttggctgtg
ttccatggacactatatcaatggggggttcacggtgcccttttataaacagctcctgggg
aaacccattcagctctctgatctggaatctgttgacccagaactgcacaaaagtttagtc
tggattctagagaacgatatcaccccggttctggaccatactttctgtgtggaacacaat
gctttcggaaggattttacagcacgaactcaaaccaaacggcaggaacattccagtgaca
gaagagaacaagaaagaatatgtcaggctgtatgtgaactggcgatttatgaggggcata
gaagcacagttcttggctctgcagaaaggttttaacgaactcattccccaacacctcctc
aagccttttgaccagaaggaacttgagctaatcataggaggcctggataagatagacctg
aatgactggaagtcaaacacacgtctgaagcactgcatggcagatagcaatattgtgaag
tggttctggcaagcggtggaaacatttgatgaagaaagaagggcaaggcttttgcagttt
gtgacgggttcgacgcgtgtcccacttcaaggtttcaaggctttacaaggttctacaggc
gctgcaggacccagattgtttaccatccatttaatagatgcaaacacagacaaccttcca
aaagcccacacttgctttaaccggattgacattccgccttatgagtcatatgagaagctt
tacgagaagctgttgacagctgtggaagagacatgtggctttgctgtggagtga
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