KEGG   Lagopus muta (rock ptarmigan): 125701029
Entry
125701029         CDS       T09141                                 
Symbol
NELFCD
Name
(RefSeq) negative elongation factor C/D
  KO
K15181  negative elongation factor C/D
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125701029 (NELFCD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmut03021]
    125701029 (NELFCD)
Transcription machinery [BR:lmut03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     125701029 (NELFCD)
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 125701029
NCBI-ProteinID: XP_048818425
LinkDB
Position
16:3049753..3059206
AA seq 583 aa
MEDADYFEGGAAEWGNEADGGAQDDEDGEGEDDAEVQQECLKKFSTPDYIMEPSIFNTLK
RYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHF
DPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGE
ITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQSMMSI
LAQEEQGGSAVRRIAQEVQRYAHEKGHDASQITLALGTAASYPRACQALGAMLSKGALNP
ADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHILAYAASVV
EMWKKNKRVSINKDELKSTSKAIETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGV
LKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVM
EQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTS
DFVQLFLPILENESIAGTIKTEGEHDPVTEFIAHCKSNFIVMN
NT seq 1752 nt   +upstreamnt  +downstreamnt
atggaggatgcggattacttcgagggcggcgcggcggagtggggcaacgaagcggacgga
ggagcgcaagatgatgaggatggagagggagaagatgatgctgaagtccagcaggagtgc
ctgaagaagttttcaacccctgactacatcatggagccgtcgatatttaacacgctgaaa
aggtatttccaagcaggaggttctccagagaacgtgatccaacttctgtctgaaaactac
acggcagtggcacagacggtgaacctgctggcagagtggctcattcagacaggtgttgag
ccagtgcaagttcaggagactgtagaaaaccacttaaagagcttactgatcaagcacttt
gaccctcggaaagcagattccatctttacagaggaaggagagactccagcttggcttgag
caaatgatagcacatacaacatggagagatctcttctacaagttggcagaagcccatcca
gactgtttaatgcttaattttactgtgaagcttatatctgatgctggttatcaaggagaa
ataaccagtgtttcaacagcctgtcagcaactggaggtgttttccagagttctgcgtaca
tctctggcaacaattttagatggaggggaagaaaaccttgaaaagaacctcccagagttt
gctaagatggtgtgccacggagagcacacgtacctttttgctcaatctatgatgtccata
ttggctcaagaagagcagggagggtctgctgtcaggcggatcgctcaggaggttcagcga
tatgctcatgagaaaggccacgatgccagtcagatcactttagcactgggtactgcagcc
tcctaccctcgtgcctgccaggctctcggtgcaatgctgtccaaaggagctctgaatcca
gcagatattactgtcttgttcaaaatgtttaccagcatggacccacctccagtagaactg
atccgagtgcctgcctttctggacctcttcatgcagtcactgtttaaaccaggtgctaag
atcaaccaggaccacaagcataaatacattcacatactggcatatgcagccagtgtagtg
gagatgtggaaaaagaacaagagagtgagcataaacaaggatgagctgaaatcaacttca
aaagccattgaaactgttcacaatctgtgttgcaatgagaacaaaggagcatcagagttg
gttgcagagctgagcaccctttatcagtgcatcaggtttccagtggtggcaatgggtgta
ttaaagtgggtggattggacagtgtcagagccccggtacttccagctgcagactgatcac
actcctgttcatctggcattattggatgagatcagtacgtgccatcagctgcttcatcca
caggttttacagcttcttgtcaaactctttgaaacagaacattcacagcttgacgtaatg
gagcagctggaactgaagaagactctcctggatagaatggtgcacttgcttagtcgagga
tacgtcctgcctgtggtcagctatatccgcaaatgcctggagaagttagacacagatatc
tctctcatcagatactttgttacagaggtgctggatgtgattgctcctccttatacctca
gatttcgtacagctttttcttccaatcttggagaatgaaagtattgcaggtactattaaa
acagaaggtgaacatgatcctgtcactgagtttatagctcactgcaaatctaactttatc
gtgatgaactaa

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