Lagopus muta (rock ptarmigan): 125701029
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Entry
125701029 CDS
T09141
Symbol
NELFCD
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125701029 (NELFCD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125701029 (NELFCD)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
125701029 (NELFCD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
125701029
NCBI-ProteinID:
XP_048818425
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Position
16:3049753..3059206
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AA seq
583 aa
AA seq
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MEDADYFEGGAAEWGNEADGGAQDDEDGEGEDDAEVQQECLKKFSTPDYIMEPSIFNTLK
RYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHF
DPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGE
ITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQSMMSI
LAQEEQGGSAVRRIAQEVQRYAHEKGHDASQITLALGTAASYPRACQALGAMLSKGALNP
ADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHILAYAASVV
EMWKKNKRVSINKDELKSTSKAIETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGV
LKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVM
EQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTS
DFVQLFLPILENESIAGTIKTEGEHDPVTEFIAHCKSNFIVMN
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgcggattacttcgagggcggcgcggcggagtggggcaacgaagcggacgga
ggagcgcaagatgatgaggatggagagggagaagatgatgctgaagtccagcaggagtgc
ctgaagaagttttcaacccctgactacatcatggagccgtcgatatttaacacgctgaaa
aggtatttccaagcaggaggttctccagagaacgtgatccaacttctgtctgaaaactac
acggcagtggcacagacggtgaacctgctggcagagtggctcattcagacaggtgttgag
ccagtgcaagttcaggagactgtagaaaaccacttaaagagcttactgatcaagcacttt
gaccctcggaaagcagattccatctttacagaggaaggagagactccagcttggcttgag
caaatgatagcacatacaacatggagagatctcttctacaagttggcagaagcccatcca
gactgtttaatgcttaattttactgtgaagcttatatctgatgctggttatcaaggagaa
ataaccagtgtttcaacagcctgtcagcaactggaggtgttttccagagttctgcgtaca
tctctggcaacaattttagatggaggggaagaaaaccttgaaaagaacctcccagagttt
gctaagatggtgtgccacggagagcacacgtacctttttgctcaatctatgatgtccata
ttggctcaagaagagcagggagggtctgctgtcaggcggatcgctcaggaggttcagcga
tatgctcatgagaaaggccacgatgccagtcagatcactttagcactgggtactgcagcc
tcctaccctcgtgcctgccaggctctcggtgcaatgctgtccaaaggagctctgaatcca
gcagatattactgtcttgttcaaaatgtttaccagcatggacccacctccagtagaactg
atccgagtgcctgcctttctggacctcttcatgcagtcactgtttaaaccaggtgctaag
atcaaccaggaccacaagcataaatacattcacatactggcatatgcagccagtgtagtg
gagatgtggaaaaagaacaagagagtgagcataaacaaggatgagctgaaatcaacttca
aaagccattgaaactgttcacaatctgtgttgcaatgagaacaaaggagcatcagagttg
gttgcagagctgagcaccctttatcagtgcatcaggtttccagtggtggcaatgggtgta
ttaaagtgggtggattggacagtgtcagagccccggtacttccagctgcagactgatcac
actcctgttcatctggcattattggatgagatcagtacgtgccatcagctgcttcatcca
caggttttacagcttcttgtcaaactctttgaaacagaacattcacagcttgacgtaatg
gagcagctggaactgaagaagactctcctggatagaatggtgcacttgcttagtcgagga
tacgtcctgcctgtggtcagctatatccgcaaatgcctggagaagttagacacagatatc
tctctcatcagatactttgttacagaggtgctggatgtgattgctcctccttatacctca
gatttcgtacagctttttcttccaatcttggagaatgaaagtattgcaggtactattaaa
acagaaggtgaacatgatcctgtcactgagtttatagctcactgcaaatctaactttatc
gtgatgaactaa
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