Lagopus muta (rock ptarmigan): 125701031
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Entry
125701031 CDS
T09141
Symbol
TUBB1
Name
(RefSeq) tubulin beta-1 chain isoform X1
KO
K07375
tubulin beta
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04145
Phagosome
lmut04540
Gap junction
lmut04814
Motor proteins
lmut05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125701031 (TUBB1)
09144 Cellular community - eukaryotes
04540 Gap junction
125701031 (TUBB1)
09142 Cell motility
04814 Motor proteins
125701031 (TUBB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125701031 (TUBB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125701031 (TUBB1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmut04812
]
125701031 (TUBB1)
04147 Exosome [BR:
lmut04147
]
125701031 (TUBB1)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
125701031 (TUBB1)
Cytoskeleton proteins [BR:
lmut04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
125701031 (TUBB1)
Exosome [BR:
lmut04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125701031 (TUBB1)
Exosomal proteins of colorectal cancer cells
125701031 (TUBB1)
Exosomal proteins of bladder cancer cells
125701031 (TUBB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
125701031
NCBI-ProteinID:
XP_048818427
LinkDB
All DBs
Position
16:3065922..3072587
Genome browser
AA seq
446 aa
AA seq
DB search
MREIVHLQIGQCGNQIGAKFWEVISDEHGIDIAGNYHGNASLQLERINVYFNEAYSHKYV
PRSILVDLEPGTMDSVRSSKIGPLFRPDNFIHGNSGAGNNWAKGHYTEGAELIENVMDVV
RNECESCDCLQGFQLIHSLGGGTGSGMGTLLINKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNAILSIHQLIENTDETFCIDNEALYDICFRTLKLTNPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALSVPELTQQMFDARNMM
AACDPRRGRYLTVACIFRGRMSTREVDEQLLSVQTKNSSYFVEWIPNNVKVAVCDIPPRG
LKMAATFIGNNTAIQELFIRVSEQFSAMFRRKAFLHWYTGEGMDEMEFSEAEGNTNDLVS
EYQQYQDATADVEEYEEVEASPEKET
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcgtgcaccttcagattggccagtgtggaaaccaaattggagctaagttc
tgggaggtgataagtgatgaacatggaattgatattgctggaaactaccatgggaatgca
tcgctgcagcttgagcgaattaacgtgtacttcaatgaggcttattcccataaatatgtg
ccccgttctatcttggtggacctggagcctggtacaatggacagtgtacgatctagcaaa
attggcccactatttcgacctgacaattttattcatggtaattcaggtgctggaaacaac
tgggctaagggccattacacagaaggagctgaactgattgaaaatgtcatggatgtggtc
aggaacgagtgtgagagctgtgactgcctgcagggattccagctcatccattctcttggg
ggtggtacgggctcaggtatgggcacgctcctcatcaacaaaatcagagaagaatatccc
gacagaattatgaacactttcagcgttgttccttcacccaaagtctctgacacagttgta
gagccctataatgccatcctctccatccatcaactaatagagaacacagatgaaaccttt
tgcatcgacaacgaagcactatatgatatatgttttagaactttaaagctcaccaatccc
acctatggtgacctcaatcacttggtgtccctaacaatgagcggtgttacaacctcactc
cgttttcctggtcagctgaatgcagatctgaggaagctggctgttaacatggtgcccttt
cctcgcctgcatttctttatgccaggctttgctcctctaacagcacgaggtagccagcag
tacagagccctctcagtgccagagcttactcaacagatgtttgatgcacgcaacatgatg
gcagcctgcgacccccgtcgtgggcgttatttgactgtggcatgcatcttcaggggccga
atgtctaccagagaagtggatgaacagttactgtctgtccagaccaagaacagctcctac
tttgtggagtggatccctaataatgtcaaagtagctgtgtgtgacataccgccgcgagga
ctgaagatggcagctaccttcattggcaacaacacggccattcaggagctcttcatcagg
gtttctgaacagttttcagctatgttcagaagaaaagcgtttctccattggtacactgga
gaaggcatggatgagatggagttttctgaagcagagggaaacaccaatgaccttgtttct
gagtaccagcagtaccaagatgccactgcagatgttgaggaatacgaagaagtggaagct
agcccagaaaaggaaacataa
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