Lagopus muta (rock ptarmigan): 125701067
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Entry
125701067 CDS
T09141
Symbol
EDAR
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125701067 (EDAR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lmut04050
]
125701067 (EDAR)
Cytokine receptors [BR:
lmut04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
125701067 (EDAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
PFF1_TM
Chordopox_G3
CLN3
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
125701067
NCBI-ProteinID:
XP_048818512
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All DBs
Position
1:complement(135402930..135474488)
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AA seq
465 aa
AA seq
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MGMQEEQSSSMVKYQENMAHLGECKWTHVFPFLVVSLVYSASAEYSNCGENEYYNQTTGM
CHDCPKCEPGEEPYMTCGYGTKDEDYGCIPCPSEKFSRGGYQICRRHKDCEGFFRATVLT
PGDQENDAECGPCLPGYYMLENRPRNIYGMVCYSCLLAPPNTKECAGATSGISAIFPSTS
GTSTFSPYQHAHKADLSGQGHLATALIIAMSTIFIMAIAIVLIIMFYIVKTKPSAQACCK
SHSVKNVEAQANTQEEKKEVQDNVVIFSEKEEFEKLTATPAKAAKSENDASSENERLLSR
SMDSDEEAAVDKQGTPERCLLSLVHLARDKSSTSNKSTGIQSRRKKILDVYANVCDVAEG
LSPTELPFDCLEKTSRMLSSTYNTEKAIVKTWRHLAESFGLKRDEIGGMTDGMQLFDRIS
TAGYSIPELLTKLVQIERLDAVESLCADILEWAQAMPAPEPAVTS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgcaggaagagcaaagcagctcaatggtaaaatatcaagagaacatggctcac
ctgggagaatgtaaatggactcacgtgttcccttttctggtggtttccttggtgtactct
gccagcgctgaatactccaactgtggtgagaatgaatactacaaccaaaccaccggcatg
tgccacgactgccccaaatgcgagccgggtgaagagccgtacatgacgtgtgggtatggc
accaaagatgaggactatggttgcatcccctgcccgtcagagaagttttccagaggaggt
taccagatatgcagaaggcacaaagactgcgagggattttttcgagccactgtcctgaca
ccaggagatcaagagaatgatgcagagtgcgggccttgtctcccaggttactacatgctg
gaaaacagacctcgaaacatatatggaatggtttgctactcatgcttgttggcacctcct
aacaccaaagaatgtgcaggggctacctctggcatttcagccattttcccaagcacctct
ggcacaagtaccttctcaccttaccagcatgctcacaaagcagacctttcaggacaagga
catctggctacagctctgataattgcaatgtctaccatattcataatggcaattgccatt
gtcctcatcataatgttttacattgtgaaaaccaaaccttctgctcaagcctgttgcaag
agccactcagtaaaaaatgtcgaagctcaggctaatacacaagaagagaagaaagaagta
caagataatgttgtgatattctctgagaaagaagagtttgaaaaacttacagcaactcca
gctaaggctgctaaaagtgaaaacgatgcatcttctgagaatgaacgacttctaagtcgt
agcatggatagtgatgaagaagctgcagttgacaagcaagggacaccagagagatgcttg
ttatctttagtgcatttggccagagataaatcttctacaagcaataaatcaacagggatt
caaagtcgaaggaaaaagatacttgatgtgtacgctaacgtatgtgacgttgcagaaggc
ctgagccctacggagctgccgtttgactgcttggagaagaccagccgaatgctcagttca
acatacaacaccgagaaggccatagtgaaaacgtggcgtcaccttgctgagagcttcggg
ttgaagagggacgaaattggtggcatgacagatggcatgcagctgtttgaccgcatcagc
acagcaggctacagcatcccagaactgctcaccaaactggtacaaattgagcggttggat
gctgtcgagtctctgtgtgcagatatcctggagtgggcacaagcaatgcctgctcctgaa
ccagcagtgacttcctga
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