Lagopus muta (rock ptarmigan): 125701088
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Entry
125701088 CDS
T09141
Symbol
TOP1
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmut03032
]
125701088 (TOP1)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
125701088 (TOP1)
DNA replication proteins [BR:
lmut03032
]
Eukaryotic type
DNA Topoisomerases
125701088 (TOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
125701088
NCBI-ProteinID:
XP_048818571
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Position
16:12885086..12947596
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AA seq
766 aa
AA seq
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MSGDQLHNDSQIEADFRANDSHKHKDKHKDREHRHKEHKKDKEKDREKSKHSNSEHKDSS
EKKHKDKEKTKHKDGSSEKHKDKHKDKDKEKRKEEKIKLSSGDIKIKKEKENGFSSPPRI
KDEPDDDGFYASPKEDSKPLKRPREDDDADNKPKKMKTENINKAKKRKQEEEEDSKAKKA
KNKDKKSPEVDKRKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVK
FYYDGKVMKLSTKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTSEEKSTITSLSK
CDFTHMSQYFKAQTEARKQMSKEEKQKIKEENERLLKEYGYCVMDNHKERIANFKIEPPG
LFRGRGNHPKMGMLKRRIMPEDIIINCSKDSKVPPPPPGHKWKEVRHDNKVTWLVSWTEN
IQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVAL
YFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLHPELDGQEYVVEFDFLGKDSIRYYN
KVPVEKRVFKNLQLFMENKQPEDDLFDRLNTSILNKHLQDLMEGLTAKVFRTYNASITLQ
QQLKELTNPEDNIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQSKIDAKKEQLA
DARRELKSAKADAKVRRDEKSKKAVESKKKAVQRIEEQLMKLEVQATDREENKQIALSTS
KLNYLDPRISVAWCKKWGIPIEKIYNKTQREKFAWAIDMAEEDYEF
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggaccagctgcacaacgactcccagatcgaggcggatttccgagccaacgat
tctcacaaacacaaagataaacacaaagaccgagaacaccggcacaaagagcacaagaag
gacaaggaaaaagaccgggaaaagtccaagcacagtaatagtgagcacaaagactcctcg
gaaaagaaacataaagacaaggagaaaaccaaacacaaagatggcagctcagagaaacac
aaagacaaacacaaagacaaagacaaggagaagagaaaggaagaaaagattaaattatct
tctggtgatataaaaataaagaaggaaaaggaaaatggtttctccagtccaccacgtatt
aaagatgaaccagatgatgacgggttttatgcttctcctaaagaggactccaaacccctg
aagaggcctcgagaagatgacgacgctgacaacaaacccaagaaaatgaaaacagaaaac
attaataaagcaaagaaaaggaaacaagaagaagaagaggacagcaaagcaaagaaagct
aagaacaaagataagaaaagccctgaagtggacaaaagaaagaaaccgaaaaaagaagag
gagcagaaatggaaatggtgggaagaagagcgctaccctgaaggaattaaatggaagttc
ttagagcataaaggtcctgtatttgctccaccatatgaaccactgcctgaaaatgtcaag
ttttactatgatggtaaagtcatgaagctgagcaccaaagcagaagaagttgccacattc
tttgcaaaaatgcttgaccatgaatacactacgaaggagatcttcaggaaaaacttcttt
aaggactggagaaaggaaatgacctctgaagagaagagcacaatcaccagcctcagcaag
tgtgacttcacccacatgagccagtatttcaaagctcagacagaagctaggaaacagatg
tccaaggaggagaaacagaaaatcaaagaggagaatgagcggctattgaaggaatatggt
tactgtgtgatggacaaccacaaagagaggattgctaacttcaagattgaacctccaggt
ctcttccgaggccgggggaaccatcccaaaatgggcatgttgaagagacgcatcatgcca
gaagacatcatcattaactgcagcaaggattccaaggtccctccccctccaccaggacac
aaatggaaggaggtccggcacgataacaaggttacctggctagtgtcatggacagagaac
atccaaggctctatcaaatacataatgttgaaccctagctcaagaattaagggtgagaag
gactggcaaaagtatgagacggcccggaggttgaagaagtgcgtagataaaatccgaaat
caatacagagaagattggaaatccaaagagatgaaagtacggcagagggctgtggcactg
tacttcattgacaaacttgctctgagagctggcaatgaaaaagaagaaggggaaacagct
gacaccgtgggctgctgctctctgcgagtagaacatatcaagctgcatcctgagctggat
ggccaggaatacgtggttgagtttgacttcctcggaaaagactccatccgatactacaac
aaagtccctgttgagaagagggtttttaagaatcttcagctgttcatggagaacaagcag
cctgaggatgacctttttgaccgcctcaataccagtatcttaaataaacatcttcaagac
cttatggagggactgacagccaaggtattccgtacttacaatgcctccatcacgctacag
cagcagctcaaggagctcactaacccggaggataacatcccagcgaagatcctttcctat
aaccgtgccaacagagcggttgccattttgtgtaaccaccagagggctccaccgaagact
tttgagaagtccatgatgaacctgcagagcaagatcgatgccaagaaggagcagttagct
gatgccaggagagaactgaaaagcgccaaagctgatgccaaggtccggagggatgagaag
tctaaaaaggcagtggagagcaagaaaaaagcagtgcagaggattgaggagcagctgatg
aagctggaggttcaggctacagatagggaggagaacaagcagatcgccttgagcacctcc
aaactcaactatctggatcctaggatctctgttgcttggtgtaagaagtggggaattcct
atagagaagatatataacaaaacccagcgagagaaatttgcctgggctatcgacatggca
gaggaagactatgagttttaa
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