Lagopus muta (rock ptarmigan): 125701214
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Entry
125701214 CDS
T09141
Symbol
RTEL1
Name
(RefSeq) regulator of telomere elongation helicase 1 isoform X1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmut03032
]
125701214 (RTEL1)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125701214 (RTEL1)
DNA replication proteins [BR:
lmut03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125701214 (RTEL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
ARCH_RTEL1
Helicase_C_2
HHD_RTEL1
ResIII
DEAD
RNase_T
Motif
Other DBs
NCBI-GeneID:
125701214
NCBI-ProteinID:
XP_048818844
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All DBs
Position
16:4250884..4288157
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AA seq
1320 aa
AA seq
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MPRITLRGVTVDFPFQPYECQETYMAKVLECLQTKVNGILESPTGTGKTLCLLCSTLAWR
EHFKDTISARKIAQRMNGVELFPDRPMSSWGNAATDGDIPTYYTDIPKIIYASRTHSQLT
QVINELKNTVYRPKICVLGSREQLCINPEVKRQESNHMQIYMCRKKVMARACHFYNNVEE
KSTEKGLMDSIMDIEDLVKNGSKHRACPYYLSRSLKQQADIIFMPYNYLLDAKSRRAHNI
ELKGTVIILDEAHNVERLCEESSSFDLTAYDLASAIDVINVVLEEQAKVVQQNEVNAEFN
MENISSGLNMELEDIAKIKKILLQLESAIDAVELPPNDSGVTKDGSYIFELFAKAQITFQ
TKASLLESLEQILQFLSGRTGIFINTSGLHKLSDIIQTVFNIDPPEDTTGFVPPQSISRY
YKVHIHLDNSNQKKKKERTDLWDSSAAKKQGKTLSYWCFSPGYSMHELVRQGVRTIILTS
GTLSPLSSFTMEMQIPFPVLLENPHVIDKRQLWVGIIPKGPDGAVLNSTYERRFSEDYLS
SLGKTIGNLVRVVPHGLLVFFPSYPVMDKSLEYWREHDFAKRIEEVKPMFVEPRNKGSFA
EVIDAYYGKIACPKSNGAAFLAVCRGKASEGLDFADMNGRGVIITGLPFPPRWEPRVVLK
MQFLNEMKKSSMGAQYLSGHQWYNQQASRAVNQAIGRVIRHRQDYGAIFLCDDRFTTDNV
RGKLPSWVRPYVNVYDNFGHAVRSVSVFFRVAQEIMPLPAAQCPSGSAVSLSENDGEPST
SSEQILSLQKAKILDDHVPSLKRKRMAMPVNGGGASRLCTEYEQEMISPRRQCVGLLDAL
ERSEKNSKEVEEDDGLPGEEKAQRLSTLSLQYEKRLTDEQKGGRKKIKLVSNPLANKAAD
PTEPKKARATLYIATVKKTLSQQNYNLFSEALQRYRSTADFNTMLAQMSSLFTEDEAKHV
LLREFYQFVRPHHKKQFDEACCNLTGVGCGYKPEHSLLLEEREGLAKKIEEKESRQKTTC
SENSCTQLNAGLHLNQGGFHLTTGQTSAGDNTSQAVSKDMKNASGSRRDQHQVLRVTYLN
DVKKALKESAYSRFHEALLAYKRTDDYDAMIPVVAALTTERPEDFHLLQRFAMFVRPHHK
EQFRQVCKDLTGAVGADEQKQQMQNEKGAATLERWLTKRANCPNEDGDVPKSEVPERNGG
ETSSSCLSQKCKLELPKAEVSKEMSHVRAPTAPGVVPSLPLELDPEFGRYQCPNCKSEDD
VPLKCPLCIFTCCKTCWERFLKVCQSCKCETTALKLVATSPSSLFAFLYALLAVKAVVAC
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggatcacgctgaggggcgtgacggtggatttccctttccagccctacgagtgc
caggagacgtacatggccaaagtgctcgagtgtctgcagacgaaagtaaacggcattcta
gagagccctacaggaacaggaaaaaccctatgcctgctctgttccactctggcctggagg
gaacatttcaaagataccatctcagcccgcaaaattgcacagcgtatgaatggagtcgaa
ctcttccctgacagacccatgtcttcctggggcaatgctgccacagatggtgacatccca
acgtattacacagacattcctaaaataatttatgcatccagaactcactctcagcttacg
caggtcattaacgaattaaagaacacagtctacaggccaaagatatgtgttttgggttcc
agagagcagctttgcatcaatcctgaagtgaaacgacaggagagtaaccacatgcagatc
tatatgtgccgaaagaaagtgatggctcgtgcttgtcacttctataacaatgtggaagag
aagtctacagagaaaggactgatggattcaatcatggatattgaagatttggttaaaaat
ggaagcaagcacagagcttgtccttattatctgtctcgaagcctgaagcagcaggcagat
attatttttatgccttacaactatttattggatgcaaagagccgacgagctcacaacata
gagctgaaggggactgtgataatacttgatgaagctcacaatgtggaaagactgtgtgaa
gagtcgtcttcttttgacctgacagcctacgatttggcttcagcaattgatgttataaat
gtagtactggaagaacaagccaaagtggttcaacagaatgaagtaaatgctgaattcaat
atggagaacatcagttcagggctgaacatggaacttgaagatatagcaaagataaagaaa
attcttcttcagctagaaagtgcaattgatgcagtggagctgccaccaaatgacagtgga
gtcaccaaagatggaagctacatctttgaactgtttgcaaaggcccaaataacgtttcaa
accaaagcctcactcctggagtcactagagcagattttacagtttctttcaggccgcact
gggatatttatcaatacctcaggattgcataaactctcagatattatccagactgtattc
aacattgatcctccagaagacacaacaggttttgtgccacctcagtcgatatccagatat
tataaggtacacattcatctggataacagtaatcagaagaagaagaaggaaaggacagat
ctctgggattcatcagctgcgaaaaaacaaggaaagaccttaagctattggtgtttcagc
cctggatatagcatgcacgagcttgttcgacagggagtcaggacaattatccttactagt
gggactctctctcctctctcatcatttacaatggaaatgcagatcccttttcctgttctc
ttggagaatcctcatgttattgataaacggcagctctgggttggaatcattcccaaagga
ccagatggagctgtgctcaattctacttatgagagaaggttttcagaggactatttatct
tctctggggaaaaccattggtaatcttgtgcgagttgtacctcatggactgctggtattt
ttcccatcatatcctgtcatggataaaagcctggaatactggagagagcatgattttgct
aaaaggatagaagaagtgaagccaatgtttgtggaacccaggaataaaggaagctttgct
gaggtaatagatgcatactatggtaaaattgcctgtcctaagtccaatggtgctgctttt
ttggcagtgtgtcgagggaaggccagcgaaggcttggactttgcagacatgaatggacga
ggagtcatcattactggccttccatttcctcctcgttgggagcccagagttgttttgaag
atgcagttcctgaatgagatgaagaaaagtagtatgggtgctcagtatttatctgggcat
cagtggtacaatcagcaagcttcccgagctgttaaccaggctattggcagggtcatcagg
catcgccaggactatggtgctatcttcctatgtgatgacagattcacaactgataatgtc
agaggcaagctgccttcgtgggtccgcccttacgtgaacgtttatgacaactttgggcat
gcagtcagaagtgtttcagtcttcttccgtgttgctcaagaaattatgcccctgcctgct
gcacagtgcccttctggctctgctgttagcctgagtgaaaatgatggggaaccttctact
tcatctgagcagatcctctccctgcagaaagccaaaattttggatgaccacgttcccagt
ctgaagaggaaaaggatggcaatgccagtaaatggaggtggagcatccaggctctgcaca
gaatatgagcaagagatgatctcacctagaagacaatgtgttgggcttctggatgcgttg
gagcgcagtgagaagaacagcaaagaggtggaggaagatgatggtttgccaggggaggaa
aaggcacaacgtctgtcaacgctttcccttcagtatgagaagaggttaacagatgagcag
aaaggaggaaggaagaaaataaagctggtcagcaatccactggccaacaaggcagcagac
ccaacggagccaaagaaggcccgagcgaccttatacattgcaacagtgaagaagacccta
agccagcaaaactacaatctcttctctgaggctcttcagcgctacaggagcacggctgac
ttcaacactatgttggctcaaatgagttccctttttacagaggatgaagcaaagcatgtc
ttgttgcgagaattttaccagtttgttcgacctcaccataagaaacagtttgatgaagca
tgttgcaatctgactggggtgggctgtggatacaaacctgagcacagcctcctgctggaa
gagagagaaggactggcaaagaaaatagaagaaaaagagagtcggcagaaaacaacctgc
tcagagaactcatgcactcagctgaatgctgggctccacttgaaccagggaggatttcac
ttgacaacaggacagaccagtgcaggggacaacaccagtcaagctgtgagtaaagacatg
aaaaatgcctcaggctcaaggagagatcagcaccaggtcctcagggtgacctacctcaat
gatgtgaaaaaggctttgaaggaaagcgcctacagccgcttccacgaggcgctgctggct
tacaagaggacggatgactacgatgctatgataccagtggtggcagccctcaccacggag
aggccagaagactttcatctcctgcaaaggtttgccatgtttgtgcggccgcatcacaag
gagcagttcaggcaggtgtgtaaagatctgactggagcagttggtgctgatgaacagaaa
cagcagatgcagaatgaaaaaggtgctgcaactctggagaggtggttgactaaaagagca
aactgccctaatgaagatggagatgttcctaagagtgaggttccagaaagaaatggggga
gagacttcttcctcgtgcctcagccagaaatgcaaacttgaattaccaaaggctgaagta
tctaaagaaatgagtcacgtgagagcacccacagctcctggagttgtgcccagcttacca
ctggagttggatccagagtttggaagataccaatgtcctaactgcaaatctgaggatgat
gtacccttaaaatgcccactgtgcatcttcacttgctgcaaaacatgttgggaacggttc
ttaaaggtgtgccagagctgtaagtgtgagacaactgctctgaaacttgttgctacttca
ccaagcagcctttttgctttcctctatgcgttgctagcagttaaagcagtggttgcatgc
taa
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