Lagopus muta (rock ptarmigan): 125701223
Help
Entry
125701223 CDS
T09141
Symbol
CDH4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04514
Cell adhesion molecule (CAM) interaction
lmut04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125701223 (CDH4)
04519 Cadherin signaling
125701223 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125701223 (CDH4)
Cell adhesion molecules [BR:
lmut04515
]
Cadherins
Major cadherins
125701223 (CDH4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
F59B103_C
NCMAP
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
125701223
NCBI-ProteinID:
XP_048818859
LinkDB
All DBs
Position
16:complement(6307634..6720778)
Genome browser
AA seq
914 aa
AA seq
DB search
MRTGSRLLLLVLLVWGSAAALNGDLTVRPTCKPGFSEEDYTVLVSQNIVEGQKLLKVKFN
NCAGNKGVRYETNSLDFKVRADGTMYAVHEVQMASKQLILMVTAWDPQTLGRWEAIVRFL
VGEKLQHNGHKPKGRKSGPMDLAQQQSDTLLPWRQHQSAKGLRRQKRDWVIPPINVPENS
RGPFPQQLVRIRSDKDKEIHIRYSITGVGADQPPMEVFSIDPVSGRMYVTRPMDREERAS
YHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTVTAN
DADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYIVIVQAT
DMEGNLNYGLSNTATAIITVTDVNDNPPEFTTSTYSGEVPENRVEVVVANLTVMDRDQPH
SPNWNAIYRIISGDPSGHFTIRTDPVTNEGMVTVVKAVDYEMNRAFMLTVMVSNQAPLAS
GIQMSFQSTAGVTISVTDVNEAPYFPTNHKLIRLEEGVPTGTVLTTFSAVDPDRFMQQAV
RYSKLSDPANWLNINATNGQITTAAVLDRESDYIKNNVYEATFLAADNGIPPASGTGTLQ
IYLIDINDNAPELLPKEAQICEKPNLNVINITAADADIDPNVGPFVFELPSVPSAVRKNW
TITRLNGDYAQLSLRIMYLEAGVYDVPIIVTDSGNPPLYNTSIIKVKVCPCDENGDCTTI
GAVAAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDNILK
YDEEGGGEEDQDYDLSQLQQPETMDHVLNKAPGVRRVDERPIGAEPQYPIRPVIPHPGDI
GDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDWGPR
FKKLADMYGGGEED
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccggctcgcggctgctgctgctggtgctgctcgtctggggctcggcggcggca
ctcaatggggatcttacagttagacccacatgcaagcctggcttttcagaagaagactac
acagtgctcgtttcccagaatattgtggaaggccagaagctactcaaagtaaaatttaat
aactgtgccggtaacaagggagttcggtatgaaaccaacagcctggacttcaaggtgaga
gcagatgggaccatgtatgctgtccacgaggtgcaaatggcctcaaagcagttgatcctg
atggtgaccgcctgggatccgcagacccttggcaggtgggaggccatcgtcaggtttctg
gtgggagagaagctgcagcacaatggacacaagccaaagggaaggaagagtggacccatg
gacctggcacagcagcaaagtgacaccctgctcccctggcgccaacaccagagcgcaaaa
ggcctccggagacagaagcgagactgggtcatcccccccatcaacgtgccagaaaattca
aggggcccttttcctcagcaactggtccggattcgttccgataaggacaaagagatccat
atcaggtacagcatcaccggagtgggagccgaccagccgccaatggaagtcttcagcatt
gaccctgtgtcggggaggatgtatgtgacccgcccaatggacagagaggaaagagcttcc
taccatctccgggctcatgcagtggatatgaatggaaacaaggtggagaatcctattgac
ctttacatctatgtgattgatatgaatgacaacagaccggagtttataaaccaagtctat
aatggatctgttgatgaaggctctaaaccaggtacctacgtgatgacagtgactgcgaat
gacgctgatgacagcaccacggcgaacgggatggtaagataccgaatcgtgactcagacc
ccccagagcccatcgcagaacatgttcaccattaacagcgagacaggagatatcgtcacc
gtggctgctggcctcgacagggagaaagttcagcagtacatagtcatcgttcaagccaca
gatatggaaggaaatcttaactacggtctctcaaacacagcaactgcaatcattacagtg
acagatgtgaatgacaacccccctgaattcacgaccagcacttattcgggggaagttcct
gagaacagagtggaggttgtggttgcaaatttgacagtgatggaccgggaccagcctcac
tctcccaactggaatgccatctaccgcatcatcagcggggatccctctggccacttcacc
atccggacagaccctgtcaccaatgagggcatggtaactgtggtcaaggcagtcgactat
gagatgaacagagcattcatgctgacagtgatggtatccaaccaagcacccctggccagc
ggaatccagatgtccttccagtcgacagcaggagtcaccatttcagttacggatgtcaac
gaagcgccatacttcccaacgaaccacaagctgatcaggctggaggaaggtgtgcccaca
gggactgtcctcacgaccttttcagctgtagatcctgatcgcttcatgcagcaggcagta
agatactctaagctgtcagatcctgcaaactggctgaacattaatgccacaaatggtcag
atcactactgctgctgtccttgatcgagagtcagactacattaagaataatgtctacgag
gccacattcttggcggctgacaatggtatacccccggccagcggcactggcacgctgcag
atctacctaatcgacatcaacgataatgctcctgagctcctgccaaaggaagcacagatc
tgtgaaaagccgaacctgaatgtcatcaatatcacagccgcagatgctgacatcgatcca
aacgttgggccctttgtcttcgagctgccaagtgtgccatctgcggtgaggaagaactgg
accataacacgactgaatggtgattacgcccagcttagtttacggatcatgtacctggaa
gctggtgtgtacgatgtgccaatcatcgtgacggactcaggaaacccccccctgtacaac
acgtccatcatcaaagtgaaggtgtgcccgtgtgacgagaatggtgactgcaccaccatc
ggggcggtggctgctgcaggactgggcacgggagccatcatcgccatcctgatctgcatc
attatcttactaaccatggtgctgctgtttgtggtgtggatgaagcgccgggagaaggag
cggcacaccaagcagctcctcattgaccccgaggatgacgtgagggacaacatcctgaag
tacgacgaggagggcggtggagaagaagatcaggattacgacttaagccagctccagcag
ccagagaccatggatcacgtgctgaacaaggcacctggagtccgaagggtggatgagaga
ccgatcggtgctgagccacagtatcctataagaccagtaatcccccatcctggggatatt
ggtgactttataaatgagggcctgcgtgcggcggacaacgaccccacagcccccccgtac
gactcactgctggtctttgactacgagggcagcggctccaccgccggctccgtcagttcc
ctcaactcctccagttccggggaccaggactacgactacctgaacgactgggggccgcgc
ttcaagaagctggcggacatgtatggaggaggcgaggaggattga
DBGET
integrated database retrieval system
