Lagopus muta (rock ptarmigan): 125701280
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Entry
125701280 CDS
T09141
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125701280 (CHD6)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125701280 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Chromo
Helicase_C
BRK
ResIII
HTH_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
125701280
NCBI-ProteinID:
XP_048819028
LinkDB
All DBs
Position
16:13909652..13984336
Genome browser
AA seq
2856 aa
AA seq
DB search
MVCGEPVCRTVWNGVCAIWEANETHACGICVLNACQMFLGSLAPIPGAVGADNCWPFSNV
CWSGGSHKACQLCWSTVERLCWEDVELKLRCVPLTVPMVSSSNPGRATWNSEITFIPDLM
IMKIQKKDKQPPSLKVLSRSPMSDASDTWECKAQGPLAGSEEQQTHRATATEAGGQCLCP
EEQPDGAPLRRPSAQNGMQDTGAVGTGVKKKRKKKDLGEQEGGEKATVEVKPKRRREPKE
PKEPKKAKEPKKQKEPKQREVTKKPRKPREPKAPKEPKDRKSGSEPGPRTRPKKSSKEQG
PTPVEKKKKGKRKNEIPVDSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNE
DLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKETHP
GGLTFEMEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDED
LFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEA
LQIPPEIKHMVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCI
LADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQ
ISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRL
KNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLK
TEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS
KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAG
KLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAID
RFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK
VYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKVEVEDLLRKGAYGA
LMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFW
QKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSR
RFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVK
HYKGDEKIKSFIWDLITPTKDGQNQALQNHSGSLSAPVPRGRKGKKTKNQMLLPEIKNAD
WLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDV
LLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSA
EQGISDGAQDTAERGTMEKEESNGEKVEGLPKQEDVVAAGAGEAGEKRDEPSAAQDGSDS
DRSCWPVSSALTARLRRLVTVYQRCNRKELPARSEMLVPGNHGYWLQDEVFRRASEMDSV
NKEMQRRWTRREQADFYRTVSSFGVIYDQEKKTFDWTQFRAISRLEKKTDESLEKYFYSF
VAMCKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQVLRCPQLHERL
KLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTG
IPGSESLCCLYQTNSKLYSSPLYSQVDRTCESLENETESQIKLENTDSTMSQAGGSPPDA
NCETFMSKVRDIISSNYDESSLPDSLMCMMYDEKVCNSEQSSLARDSPTCTDVGSSIAKL
SEGKLEGDEDPSSCDAEAMREASFLEGLQVGCDQMDCQNEEAEPSPSTPESDPSRSVPAE
LCEAVQQKRDLSSPAPVLSEHRAMEGVISVGLYSPSLHNYDMKVPSEQRFINLLQEKGME
AKAGPSQSHSEEDEEEEDDDNSEAAADVAEGLSGPRARASCDELGGEEQSLGLPSHEDTC
PEDVNSERGSLGLGTLEVPAETGPEGREDHSLDEENTLQHLPGQSQSRPFSLPAPPLGAL
GTQPLHAGGEAWGQETTGQAGCREALHPVPLGVKQEECEIRDEEEKTGSSQSQDGPEKYL
EEESKSSASVLPGEIDDLQDVRAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHAILK
GKWPSSSQQFETQSLLAAPAVASNAGSRNSFAESEAPDPSFNNGVLISQVQKEGFLNPAF
AKDERKHRRLYEFELERDAKQRSLEQLAAAHVHPPIVLNGWRDAAVDLSRASDGSPGNSS
PFPLNANMPKLGTVNTLQGSLGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRR
KNVEGMDLIFLKERPLPTRLQDIQDDQLQPPQNSPLPDGPAAATSTPQPVPAAGSQAEKA
VPNKSLLDWLCQQSDYTLDVPSFGTNFSDKPKQRRQRCKDPSKLDISALTGEERVPVVHK
GTGRRLGGATAPALKELPRWLDANLEYAVAADWADIVKLSGYLPESKFNRVLTEPVLRDA
GPRRRGRRPRSELIKGPGVVADSSSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVG
FPAGFAAVPAGEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNPPMATTCTATAPTSLTST
TKSGTSNAEKATEDKQSSQDAKKETLSEDKPGPSSFSNQTESAITTSSPVAFNPFLIPGM
SPGLIYPSMFLSPGIGMALPGMQQARHAEAASLESQKRKRKKAKGDAVNPEPETVSLPEK
EAANGQNCTEQTPPLPAEKEQDVPAEEEVKEVNDTN
NT seq
8571 nt
NT seq
+upstream
nt +downstream
nt
atggtctgtggtgagcctgtgtgccgtactgtgtggaatggggtttgtgctatatgggag
gcaaatgagacacatgcttgtggaatttgtgtcttaaatgcttgtcaaatgtttctgggc
tccttggctcccattcctggtgctgtgggagcagacaactgctggcccttcagcaatgtc
tgctggagtgggggctcccacaaggcctgtcagctttgttggagcaccgtggaaaggctg
tgttgggaggatgtagagctgaaactacgctgtgtccccttgactgtccccatggtgagc
agctccaatccagggagagcaacatggaactcagaaataacattcatccctgatttgatg
ataatgaaaatacagaaaaaagacaagcagccacccagcttaaaagtgctgagccgctcc
ccaatgtcggatgcctcggacacctgggagtgcaaggcgcagggccccttggccggcagc
gaggagcagcagacccacagggcgacggccacagaggcaggtgggcagtgcctgtgccct
gaggagcagcctgacggggctccgctgcggcggccaagcgcccagaacgggatgcaggac
actggggctgtgggcacgggggtgaagaagaaacggaagaaaaaggatttgggagagcag
gaaggaggagaaaaagcaactgtggaggtgaaaccaaagaggagaagagagcctaaagaa
ccaaaagagcctaaaaaggccaaggagcccaagaagcagaaggagcccaagcagagggag
gtgaccaagaagccccggaaacctcgggaacccaaagctcccaaggagcctaaggacagg
aagagcggctctgagcctggccccagaacaaggcccaagaagagcagcaaggagcagggg
cccacccctgtagagaagaagaagaaagggaagaggaaaaatgagatcccagtggacagc
ttggatttggatcaggatcttctgagcccatcagtacagagccctgaggagtctgcggag
tcggctgacagccagaaacgacgctctggccggcaggtgaagaggaggaagtacaatgag
gacctggatttcaaggtggtggatgatgatggcgagacgatagctgtgctgggagccggg
cgaacctctgcactctctgcctccactctggcatggcaggctgaggagcctcctgaggat
gatgccaatatcattgagaagatccttgcctcaaggatggtgcagaaggagactcatcct
ggaggcctgacattcgagatggaggagttctacgtcaagtacaggaacttctcctacctg
cactgtaagtgggcaactctggaggagctggagaaggacccccggatatcccagaagata
aagcgcttccgaaacaagcaggctcagatgaagcatatttttacagagcctgatgaggat
ttgtttaacccagactatgtggaggtagatcgaattctggaggtggctcacacgaaggac
cctgacaccggagaggaggtgactcactacctggtgaagtggtgctcgctgccctatgag
gagagcacctgggagctggaggaggatgttgacccagggaagataaaagagtttgaagcc
ctccaaatccctccagaaatcaagcacatggtaacgtacccagaggagcgcccagcatct
gagtcctggcagaaactggagaagtcccgagagtataagaatagcaaccagctgcgggaa
tatcagctggagggaatgaactggctgctctttaactggtataacaggaagaactgcatc
ctggctgatgagatggggctggggaagacaatccagtcaatcaccttcctctcagaaatc
ttcctgatgggcatccatggccccttcctcatcatcgctcccctctccaccatcactaac
tgggagagggagtttcgcacctggacagagatgaatgccatcgtgtaccacggcagccag
atcagccggcagatgatccaacagtatgagatggtgtacagggacacacagggcaaccct
ctgcctgggatcttcaagttccaggtggttatcaccacctttgagatgatccttgccgac
tgcccagagctgaagaagatccagtggcgctgtgtggtcattgatgaggcgcatcgcctg
aagaacaggaactgcaagctgctggaggggctgaaacttatggccctggagcacaaggtg
ctgctgacaggaacccccctgcagaactcagtggaggagctcttcagcctcttgaatttc
ctggagccacaacagtttccctcagagacagccttcctggaggagtttggggacctgaag
acagaagagcaggtgaagaagctgcaatccatcctgaagcccatgatgctgcgacggctg
aaagacgatgtagagaagaatctggcacccaagcaggagaccatcattgaggtggagctg
accaacatccagaagaaatactatcgggccattttggagaagaacttctcctttctgtcc
aagggtgccaaccagcacaacatgcccaatctcatcaacaccatgatggagctgcggaag
tgctgcaatcacccgtatctcatcaatggggcagaggagaagatcctggaagacttccgt
aaaacacacagcccggaggctccagacttccagctgcaggcaatgatccaggcagctgga
aaactggtgctcatcgacaagctgcttcccaagctgattgctggtgggcacaaggtgctc
atcttctcccagatggtgcgctgccttgacatcctggaagactatctcattcagaggcgg
tacacctatgagcgaattgatgggcgggtgcgtggcaacctgcgccaagctgccatcgac
cgcttctgcaagcctgactcagatcgctttgtcttcctactgtgcacgcgggcgggtgga
ctgggcatcaaccttactgctgctgacacctgcatcatctttgattcagactggaaccca
cagaatgacctccaggctcaagctcgctgccaccggatcgggcagagcaaggcagtgaag
gtgtatcgcctcatcaccaggaactcctacgagcgggagatgttcgacaaggccagcctg
aaactgggcctggataaggctgtgctgcaggacatcaaccgcaagggcggcaccaatggg
gtccagcagctctcaaaggtggaggtggaggacctgctgcggaaaggtgcctatggtgct
ctcatggatgaggaggatgaaggatccaagttctgcgaggaggatattgaccagatcctg
cagcgcaggacgcagaccatcacaatccagtccgaggggaagggctccacctttgccaag
gccagctttgtagcatcaggcaacagaactgacatctccttagatgaccctaacttctgg
caaaagtgggccaaaatagcagagcttgataccgatgccaagaatgaaaaggagagcttg
gtcatcgacaggccccgtgtgcggaagcagaccaaacactacaactcctttgaggaggat
gagctgatggagttctctgagctggacagtgactcggatgagcgccccactcgctcacgg
cgcttcaatgagaagacgcggcggtacctgcgggctgagtgcttccgtgtggagaagaac
ctgctcatatttggctggggacgatggaaagatatcctgacccacgggcgcttcaagtgg
cacctgaacgagaaggacatggagatgatttgtcgagcactgctggtttattgtgtcaag
cactacaaaggggatgagaagataaagagtttcatctgggatctcatcacaccaacgaag
gatggccagaaccaggcactgcagaatcactcaggtagtttgtcagcaccagtgcccaga
ggcaggaaggggaagaagacaaagaaccaaatgctgcttcctgagataaagaacgcagac
tggcttgctacatgcaaccctgaggtggtcctgcatgatgacagctacaagaagcacctc
aaacagcactgcaacaaggttctgctgcgagtgcggatgctgtactacctgaaggctgag
gtgcttggggaggccgctgacaaggcctttgagggcactcctgccagagagctggatgtg
ctgctgccagacatcgactacgtggagatcccagtggactggtggaatgctgaagctgat
aaatccttgctcatcggtgtcttcaagcacggttatgagaggtacaatgccatgcgggca
gacccggcgctgtgcttcctggagaaggtgggcatgcctgatgagaagctgctttctgca
gagcagggcatcagcgacggggctcaagacactgctgaaaggggcaccatggaaaaggaa
gagagcaatggagaaaaggtggaggggctgccgaagcaggaggacgttgtggctgctggg
gcaggtgaagctggtgagaagcgggatgagccatcggcagcccaggatggctccgactca
gacagatcctgctggcctgtctcgtctgccctcacagccaggctgcggcggctcgtcact
gtctaccagcgctgcaaccgcaaagagttgcctgcgcgcagcgagatgctggtgcctggt
aaccatggatactggctgcaagatgaggtgttccggagagcctctgagatggactcggtg
aacaaagagatgcagagaaggtggacaaggagggagcaggcagatttttaccgcaccgtc
tcttccttcggggtcatctatgaccaggagaaaaagacctttgactggacccagttccga
gccatctctcgtttggagaagaaaacagatgagagcttagagaagtacttctacagcttt
gtagccatgtgcaagaatgtctgtggtctcccactgtggaaagaagatggtcccccggat
cccgacatctacgtggagcccatcacggaggagcgcgctgccagaaccctgtaccgcatt
gagctgctgcggaaggtgcgcgagcaggtgctgaggtgtccacagctgcacgagcggctc
aagctgtgccggcccagcctctacctgcccgtgtggtgggagtgtggcaaacacgaccgg
gacctgctgatcggcaccgccaagcacggcctgaatcgcacagactactacatcatgaat
gacccgcagctgtcttttttagatgcgtacaggaactatgcccagcataaaagaacaggg
atcccaggctcggaatctctgtgctgcctgtaccagactaactccaaactctacagttcc
cctctgtatagccaggtagatcggacttgtgaatccctggagaatgagaccgagagtcag
atcaagctggaaaacactgacagcaccatgtcccaggccgggggcagccctccagatgca
aactgtgaaacgttcatgtctaaagtccgggacatcatttccagtaactacgatgagagc
tcgctgccggactcgctgatgtgcatgatgtatgacgagaaggtctgcaacagtgagcag
agctcccttgcccgagacagcccgacctgcacagatgttggaagcagcattgctaaactg
tctgagggcaagctagagggggacgaggatccatccagctgtgacgcggaggccatgaga
gaggcttccttcctggagggtttgcaggtgggctgtgaccaaatggactgtcagaatgaa
gaagctgagccttcaccttctactcctgaaagtgacccttcacggagcgtcccagcagag
ctctgtgaggccgtgcagcagaagagagacctcagcagccctgcgccggtgctgtctgag
caccgtgccatggaaggggtcataagtgtggggctgtacagtcccagccttcacaactat
gacatgaaggttccttctgagcagaggttcattaatctgctgcaggagaaaggaatggag
gcaaaagcaggtccaagtcagagccacagtgaggaagatgaggaagaagaggacgatgat
aactcagaggcagcagcagatgttgcagaaggcttgagtggtccgagggccagggccagt
tgtgacgaactggggggtgaggagcagagccttggcctcccctcacatgaggacacttgt
cctgaagatgtgaacagtgagagagggtccctggggctggggacgctcgaagtgcccgcg
gagactgggccggagggcagggaagaccacagcctggatgaggagaacaccctgcagcac
ttgccaggccagtctcagagccggcctttcagcctgcctgcccctccattgggggctcta
gggacacagcccctccatgctgggggagaagcctggggccaagagaccacggggcaggca
ggctgcagggaggccctgcatcctgtgcctctgggggtgaagcaagaggagtgtgagatc
agagatgaggaggagaaaactggcagcagccagagtcaagatggcccagagaaatatttg
gaggaagagagcaagagttcagcttctgtcctgcctggggagattgatgacctgcaggat
gtccgggcaccaaccatcgcccagctgctgcaggaaaagacgctttactccttctctgag
tggcctaaggatcgtgtgatcatcaaccgcattgacaacatctgccacgccatcctgaag
ggcaaatggccatcctccagccagcagttcgagacccagagtctgctggcagccccagcc
gtggccagcaatgccggcagcaggaacagctttgctgagtcagaagcccccgatcccagc
ttcaacaatggagtgttaatctcacaggtacaaaaggaaggcttcctgaaccctgctttt
gcaaaagatgagcggaagcacaggcggctgtatgaatttgagctggagagagatgccaag
cagaggagcttggagcagttggcagcagcccatgttcatcctcccattgtgctgaacggc
tggcgcgatgcggctgtggacctgtccagagcctctgatggatccccagggaactcctct
cctttccctctgaacgcaaacatgcccaagctggggactgtcaacaccctccagggctcc
ctgggcatggacttgtctggcatcttgcaggcagggttaatccatcctgtcacaggacaa
attgtaaatggcagcctccgaagagacgatgctgccatgaggaggagacggggcaggaga
aaaaatgtagaagggatggatctcatcttcctgaaggagaggcctcttccaaccaggctg
caggacattcaggacgatcagctgcagccaccccagaacagccccctcccagatgggccg
gcagctgctacctcaactccgcagccagtcccagctgcaggcagccaggctgagaaggct
gtccccaacaagagtctcctcgactggctctgtcagcagtccgactacacgctcgatgtt
cccagcttcggcacaaatttttcagacaagcccaagcagaggaggcagcgctgcaaggac
cccagcaaattggacattagtgcactcacgggcgaggagcgggtgccggtggtacataag
ggtaccggacggaggttagggggagccacggcaccagcattgaaggaattgccaaggtgg
cttgatgcaaacttggagtatgctgttgcagctgactgggctgacattgttaagctttca
ggctacttaccagaaagcaaattcaaccgtgtgctgactgagccggtgctgcgtgacgcg
gggccgcgccgcagggggaggcggcccagaagtgagctcatcaaaggccccggcgtcgta
gcagattcttcttctggaatgggaccattgttcatgaacggactgattgccggaatggac
ctagtgggacttcagaacatgagaaacatgcaagggatccccctgaccgggctggtcggc
ttccctgcgggctttgcggccgtgcccgctggcgaggacgtgaagagcaccctgagcatg
ttgcccatgatgctgccaggcatggccaccgtgccacagatgttcggcgtcggagggctt
ctcaacccacccatggcaacgacttgtaccgccaccgctccgacttccttaacaagcaca
acaaaaagtggtacatcgaacgcagagaaagctactgaggataaacagagcagccaggat
gcgaaaaaagaaactctttctgaagataagcccggccctagttcgttttctaatcagaca
gaatccgcaataactaccagtagtcctgtagcttttaacccgtttcttatcccagggatg
tcacccggactgatctatccgtcaatgtttctctcccctggcattggcatggcgctgccg
ggcatgcagcaggccaggcacgcggaggcagccagcctggagagtcagaagcggaagaga
aagaaagcgaaaggggacgcagtgaacccagaaccagaaactgtctcgctgcccgaaaaa
gaagctgcaaacggtcaaaactgtacagagcaaacaccgcctttgccagcagagaaagag
caggatgtaccagcagaggaggaggtcaaagaagttaatgataccaattag
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integrated database retrieval system
