Lagopus muta (rock ptarmigan): 125701283
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Entry
125701283 CDS
T09141
Symbol
RBL1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04110
Cell cycle
lmut04218
Cellular senescence
lmut04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125701283 (RBL1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125701283 (RBL1)
04218 Cellular senescence
125701283 (RBL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125701283 (RBL1)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
125701283 (RBL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Endonuclease_5
eIF-3c_N
Motif
Other DBs
NCBI-GeneID:
125701283
NCBI-ProteinID:
XP_048819044
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All DBs
Position
16:13985058..14005413
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AA seq
1057 aa
AA seq
DB search
MSRTEPLPEPELGAAIERLCRELNLDAGSAAEALRDFTALRGTYSLEGDAQHWLACALYA
ACRRSVLPTVGSGLMEGNCVSLTRILRSARLSLIQFFSKMKKWMDMSNVPQEFRERVERL
ERNFEVSTVIFRKFEPIFLDIFQNPNEETSKPQRSRKQRRVLCGVKDLFNFCWTLFVYTK
GNFRMIGDDLVNSYHLLLCCLDLVFANAILCPNRRDLLNPSFKGLPADFHASEMKASEDP
PCIIATLCELHDGLLVEAKGIKEHYFKPYISKLFDRKILKGECLLDLCNFTENNKALNKE
YEEYVLTVGDFDERVFLGADAEEEIGTPRKFPADLQVGKTAARAHVECHLQQHFEKKRSF
APSTPLTGRRYLREKEAVITPVASATQSVSRLQNIVAGLKNAPSDLLLAVFESCARSPAE
SIVNRVREIGETFCHSYTQPTDELPGSHIDFAVNRLKLAEILYYKILETIMVQEMRRLHG
KDMTALLEQDVFHRSLMACCLEVVLFAYSSPRTFPWIIEVLDLRPFYFYKVIEVLIRSEE
GLSRDMVKHLNSIEEQILESLAWTRDSALWTALQASGNRVPTCEEVIFPNNFEANNGGSG
LGHLPMMPISPIVHPRVKEVRTDLGGSLRRDTQPLSPISVHERYSSPTAGSAKRRLFGDD
SPKEMQMEKILTEGTKLTIAPASSIAAENVSISPGQTVLTVTTATVAGKAGQKVTIPLHG
IANELGGITLIPISMNLGQAPKIEAQDPCHPQVNQDQEVHLSSGNKPKRTGSLALFYRKV
YHLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDRHLDQLLLCAFYIMAKVT
KEERTFQDIMKSYRNQPQANSHVYRSVLLRNTSASVPVERNANQDVQMAEDSSVKSGNSL
GGSAEENCTELGTEERGDLIKFYNAVYVGRVKSFALKYDVTNQDHVMEAPPLSPFPSIKQ
QPVSPRRISQQHSVYVSPHKNSACLTPRTALLYKFNGSPSKSLKDINNMIKQGEHRSKKR
AITIDGDTEPPMKRLCQENDDVLLKRLQDVVSERANH
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcaccgagccgctgcccgagcctgagctcggcgccgccatcgagcggctgtgc
cgggagctcaacctggacgcgggcagcgcggccgaggcgctccgcgacttcacggcgctg
cgcggcacctacagcctggagggggacgcgcagcactggctggcctgcgctctgtacgcc
gcgtgccgccgcagcgtgctgcccaccgtggggagcggcctgatggagggcaactgcgtg
tcgctgacccggatcctgcgctccgccaggctcagtttgattcagttctttagcaaaatg
aagaagtggatggacatgtcgaatgtgccacaggagttccgggagcgggtggaaaggctg
gagaggaacttcgaggtgtccaccgttatcttcaggaagtttgaaccgatatttttggat
atctttcaaaaccctaacgaggaaacttcgaaaccccaacggagcaggaagcagaggcgg
gtgctgtgtggtgttaaggatctcttcaacttctgctggaccctgtttgtgtacactaag
ggtaatttccgtatgattggggacgatttagtaaattcctatcatctacttctgtgctgc
ttggacctggtttttgcaaatgccattttgtgcccaaatcgaagagatttgctaaatccg
tcatttaaaggcttaccagcagacttccatgcatcagagatgaaagcctcagaggaccct
ccgtgcatcattgccacgctgtgtgagctgcacgatgggcttctcgtggaagcaaaagga
ataaaggagcactacttcaagccgtacatttcgaagctgttcgataggaagatcttaaaa
ggagaatgtctgttggatctttgcaattttacagaaaataacaaagcgctgaataaagag
tacgaggagtatgttctaacagtgggggactttgatgagagagttttcctaggagcggat
gctgaggaagaaattggcactcctcggaagtttcctgcagatttgcaagtggggaaaaca
gcagcgagagctcacgtggagtgtcaccttcagcagcacttcgaaaagaagaggtcattt
gcaccttcaactcctctgactggaagaagatacctacgagaaaaggaagctgtcatcact
cccgttgcttcagccacacaaagtgtgagtcggctgcagaacattgtggctgggttgaaa
aacgcccctagtgacctgcttctagctgtttttgagtcttgtgcacgaagccctgcagaa
agcatcgtgaacagagtgagagaaataggggagacgttctgtcacagctacacgcagccg
acagacgaactgccaggatctcacatagattttgctgtaaacagattaaaactggcagag
atattgtactataagatcttggagactataatggtacaagaaatgcgaagactgcatggg
aaggacatgactgctctcttggaacaagatgtgtttcaccgctccctcatggcgtgctgc
ttggaggtcgtgctttttgcctacagctctcctcgcacctttccctggataatcgaagtg
cttgacctaaggccattctacttttataaggtaattgaagtactgattcggtctgaagaa
ggactttccagagacatggtgaagcacctcaacagcatcgaggagcaaatccttgagagc
cttgcctggactcgggactcagcactctggactgctctccaggcttcaggaaacagggtt
cccacctgcgaggaggtaatatttcccaataattttgaagcaaacaatggaggaagtggg
cttgggcatttgcctatgatgccaatatctcctatagttcatcctcgagtaaaagaggtt
cggacagaccttggcgggagtttaagacgggacactcagccattgtcaccaatctctgtg
catgagcgctacagctcccctacagcaggaagtgccaagaggagactctttggagacgac
agccccaaagagatgcagatggaaaagattttaacagagggaaccaagttgacaattgct
ccagcatcaagcattgctgctgaaaatgtgtccatctctcctgggcagacagtactgact
gtgacaacagcaacggtagcaggaaaagcaggacagaaagttactattccactgcatggt
atcgcaaatgagctgggtgggatcactctgatacccatctcaatgaatctaggtcaggca
cctaaaatagaggctcaggatccctgccaccctcaggtgaatcaggatcaagaagtgcat
ctctcatcaggaaacaaaccaaagagaacaggatccttggcgctgttctacaggaaggtt
taccacctggccagcgtgcgcctgcgtgacctgtgtttgaagttggatgtgtccaatgac
ttgcgcaggaagatctggacgtgctttgaattcacgttggttcactgtgctgatctaatg
aaggacaggcatttggaccagcttctcctctgtgccttttatatcatggcaaaggtcacc
aaagaggaaagaacttttcaggatataatgaaaagttacaggaatcagccacaagcaaac
agccacgtttataggagcgttttgttaaggaacacttctgccagtgtccctgtggagaga
aatgcgaaccaagacgtacagatggcagaagactcatctgtgaagagtggaaattccttg
ggaggatcggcagaggagaactgcactgagctgggaacagaggagagaggagatctcatt
aaattttacaatgccgtctatgtaggaagagtaaaatcttttgcactgaagtacgatgtc
acaaaccaggatcatgtaatggaagccccccccttgtctccgttccccagcattaagcag
cagccggtgtctcctcggcggatctctcagcagcactctgtttacgtctcgcctcacaag
aacagtgcctgcctgacgcctcgaactgcgctcctgtacaaattcaatgggagcccttcc
aagagtttgaaggatatcaacaatatgataaaacagggtgaacacaggagtaagaaacga
gccataacgattgatggcgacactgagccccctatgaagcgactctgccaggaaaacgat
gatgttctactgaagcgccttcaggatgttgtcagtgaaagagcaaatcactaa
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