Lagopus muta (rock ptarmigan): 125701303
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Entry
125701303 CDS
T09141
Symbol
PRPF18
Name
(RefSeq) pre-mRNA-splicing factor 18 isoform X1
KO
K12817
pre-mRNA-splicing factor 18
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125701303 (PRPF18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmut03041
]
125701303 (PRPF18)
Spliceosome [BR:
lmut03041
]
Complex C
Other components
Step II factors
125701303 (PRPF18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
125701303
NCBI-ProteinID:
XP_048819144
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All DBs
Position
1:6959352..6977247
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AA seq
351 aa
AA seq
DB search
MDILKREISRKRQQLEDKELVGGNKKYFKRSELAKKEEEAYFQRCGYKPVNEKPPGEVQQ
QEEEEKPLTSTNPVLELELAEEKLPMTLSRQEVIRRLRERGEPVRLFGETDYDAFQRLRK
IEILAPEVNKGLRNDLKAALDKIDQQYLNEIVGGQEAGDDDSQNDLKVHEENTTIEELEA
LGESLGRGDDHYDMDIITKFLKFLLGVWAKELNAREDYVKRGVQGKLNSATQKQTESYLR
PLFRKLRKRTLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHAR
TGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctgaagcgggagatcagccgcaagcggcagcagctggaggacaaggagctg
gtggggggaaataagaaatacttcaaacgcagtgagttagctaaaaaagaagaggaggcc
tacttccagagatgtggctacaagcctgtaaatgagaagccacctggagaggtgcagcag
caagaagaggaggagaagcctctgacttcaacaaatccagtgctggaacttgaactggca
gaagaaaaattaccaatgactctttccagacaagaggttatcaggaggttacgggagaga
ggcgagccggtcagactgtttggagaaacagattatgatgcatttcaacgtctgaggaag
atagaaattttggcacctgaagtgaacaagggcctgaggaatgacctgaaagctgccttg
gataagattgatcagcagtacttgaatgaaattgtaggtggccaagaagcaggagatgat
gactcacagaacgacttgaaagtccatgaggagaatactactattgaagaactggaggct
ttgggagagtccttaggacggggtgatgaccactatgatatggatattatcacaaaattc
ttgaagtttcttcttggagtttgggcgaaggagctgaatgccagagaggactacgtgaag
cggggagtgcagggaaagctgaacagtgccactcagaagcagacagagtcctacctgagg
ccactcttcagaaagcttcggaaaaggacacttcctgcagacatcaaagaatcaataaca
gatattataaaattcatgttgcagagagaatatgtgaaggcaaacgatgcctacctccag
atggccattgggaacgcgccgtggcccatcggtgtcaccatggtgggcatccacgctcga
acgggtcgtgagaagattttctccaagcacgtcgcccacgttctcaatgatgaaactcaa
aggaaatacattcaggggctgaagaggctgatgaccatttgccagaagcacttcccaaca
gacccatcgaaatgcgtggagtacaacgctttgtga
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