Lagopus muta (rock ptarmigan): 125701347
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Entry
125701347 CDS
T09141
Symbol
PTPRT
Name
(RefSeq) receptor-type tyrosine-protein phosphatase T isoform X1
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmut01009
]
125701347 (PTPRT)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
125701347 (PTPRT)
Protein phosphatases and associated proteins [BR:
lmut01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
125701347 (PTPRT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
MAM
fn3
DSPc
PTPlike_phytase
Y_phosphatase3
Pur_ac_phosph_N
ig
PTP_tm
TM_ErbB1
Ig_3
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
125701347
NCBI-ProteinID:
XP_048819267
LinkDB
All DBs
Position
16:10793558..11219515
Genome browser
AA seq
1518 aa
AA seq
DB search
MTGFAAIVFLLRLLREADGQAFPGGCSFDEHYSNCGYSVALGTNGFTWEQINTWEKPTMD
PAVPTGSFMMVNSSGRASGQKAHLLLPTLKENDTHCIDFHYYLSSRDRSSPGSLNVYVKV
NGGPQGNPIWNVSGVVTEGWVKAELAISTFWPHFYQVIFESVSVKGHPGYIAVDEVRVLA
HPCRKAPHFLRLQNVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHR
RFSATVSVADTSQRSISKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAVGATYLW
IKPNANSIIGDGPIILKEVEYRTTTGNWAETHIVDSPNYKLWHLDPDVEYEIRVLLTRPG
EGGTGPPGPPLTTRTKCADPVHGPQNVEVVDIRSRQLTLQWEPFGYAVTRCHSYNLTVQY
QYVFNQQKFEAEELIQTSSHYTLRGLRPFMTIRLRLALSNPEGKMESEELVVQTEEDVPG
PVPLESIQGGPFEEKIYVQWKPPNETNGIITLYEITYKAVGSLDPSADLSSQRGKVFKLR
NETHHLFVGLYPGTTYSFTIKASTVKGFGPPITTRIATKISAPSMPEYDTDSPLNETDTT
ITVMLKPAQSRGAPVSVYQLVVKEEKLQKARRAADIIECFSIPVSYKNASSLDSPHYFAA
ELKPINLPVTQPFTVGDNKTYNGYWNAPLSPLKSYSIYFQALSKANGETKINCVRLATKV
LGRQQATTRNPPGLLSTGASTQNSNAVEPEKQVDSTVKMAGVIAGLLMFVIILLGAMLTI
KRRIFCSSGWLSIFRRNAYSYSYYLHSSQCFRGLSVFYRTRKLAKKQKETQTSTQREMGP
VAASDKASTKLSAVHNEEAFSSSCQDVNGFTSPSPCSFSVQSKTLQSKSLLNSYYSVSSD
TVPSTTLLDSSHGEMTQPTLTIQTHPYRSCEPVEMSYPRGQFQPAIRVADLLQHITQMKR
GQGYGFKEEYEALPEGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLQLLDGDPHSDYI
NANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASVVMVTNLVEVGRVKCVRYWPD
DTEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIREIRQFHFTSWPDHGVPCYATGLL
GFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDIMLDMAENEGVVDIFNCVRELRSQR
VNLVQTEEQYVFVHDAILEACLCGNTAIPVCEFRSIYYNISRIDPQTNSSQIKDEFQTLN
IVTPRVRPEDCSIGLLPRNHDKNRCMDVLPLDRSLPFLISVDGESSNYINAALMDSHKQP
AAFIVTQHPLPNTVADFWRLVFDYNCSSVVMLNEMDAAQLCVQYWPEKTSCCYGPIQVEF
VSADIDEDIINRIFRICNMARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEKW
QEQYDGRDGRTVVHCLNGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVES
LEQYKFVYEVALEYLSSF
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcttcgccgcgatcgtctttctcctgcggcttttgcgcgaggcggacggacag
gctttcccaggtggttgttcctttgatgagcactacagtaattgtggttatagtgtggcc
ttgggaaccaatggatttacctgggagcagatcaatacctgggaaaagccaacgatggat
cctgcagtcccaactggctccttcatgatggtgaacagctctggacgggcatctgggcag
aaagctcacttgcttttgcccacgttgaaggaaaatgacacacactgcatcgacttccat
tattacttatccagcagagatcgctcgagtcctggctctctgaacgtctacgtgaaagtg
aatggaggaccacagggcaatcccatatggaatgtctcaggggttgttacagaaggatgg
gtgaaagcagaacttgccatcagtacgttctggccacatttttatcaggtgatatttgaa
tctgtctctgtgaaaggacatccagggtacatagctgtggatgaagtcagagttcttgcc
catccatgcagaaaagcacctcatttcttacggcttcagaatgtggaggttaatgtggga
cagaacgcaactttccagtgcattgctgggggaaagtggtcccagcatgacaaactctgg
ctccagcagtggaatgggagggacacagcattaatggtcactcgagtcgtcaaccacagg
cgtttctctgctacggtcagcgttgctgacacctcgcagcgcagcatcagcaaataccgc
tgtgtcattcgttcagatggtggatctggagtttccaattatgcagaattaatagtgaaa
gaacccccaactcctattgcccctcctgagctgctggctgttggagccacctacctgtgg
atcaaacccaacgccaactccatcattggagacgggcccatcatactgaaagaggtggag
tatcggacaaccactgggaactgggcagaaacacacattgtggactctcccaattacaaa
ctgtggcatctggacccagatgtggagtatgagatcagagtgctgctgactcgccctgga
gaaggaggcacaggaccacctggaccgccactcacaacaaggacaaaatgtgcagatcct
gttcatggaccacagaacgtagaagttgttgatatccgttcccggcagctgacattgcag
tgggagccctttggttacgcggtgacccgctgccacagctacaatctcacagtccagtac
cagtatgtctttaaccagcaaaaatttgaggcagaggaactcatccaaacatcttcccac
tacaccttgcgaggtcttcggccgttcatgaccatcaggctgagactggccctttctaat
ccagaaggcaaaatggagagtgaggagctggttgtgcagactgaggaggatgttcctgga
cctgttcccttggaatccatccagggaggaccttttgaagagaagatctatgttcagtgg
aagcctccaaatgagacaaatggcatcattacactttatgagattacttacaaggccgtt
gggtctctggatcccagtgctgacctgtccagccaaagagggaaggtcttcaaactaagg
aatgaaacacatcacctctttgtaggattatacccagggacaacgtattcattcaccatc
aaagccagcacagtgaagggctttgggccacccatcacaacacggattgcaactaagatt
tcagcaccatcgatgccggagtacgacacggactcgcccttgaatgagacagacaccacc
atcactgtcatgctgaagcctgctcagtcccggggagcccctgtcagtgtctatcaactc
gttgtcaaggaggagaagctgcagaaagctcgcagagctgcagacatcattgaatgcttc
tccatcccagtgagctacaagaacgcctccagccttgactcacctcactactttgcagcc
gagctgaagcccatcaacctgcccgtcacacagcccttcaccgtgggcgacaacaagacc
tacaatggctactggaatgctcctctttctcccctgaaaagctacagcatatactttcag
gctcttagcaaggcaaacggcgaaacaaaaatcaactgcgtccggctggcaactaaagtg
ctgggtaggcaacaggcgaccacacgaaacccacccggcctcctgagcacaggagcttcc
acccagaattccaatgcagtggagccagaaaagcaagttgacagcacagtgaaaatggct
ggagttatagctgggcttctgatgtttgttattattctcttaggagcaatgcttaccatc
aagagaaggatattttgttcgtctggctggctgtccatatttagaagaaatgcatactcc
tactcctattacttgcattcaagccaatgttttaggggcctctctgtcttctacaggacc
aggaagctagccaagaagcagaaggagactcagaccagcacacagagagagatgggtccc
gtggccgcttcagacaaggcctctaccaaactcagtgctgttcacaatgaagaagctttc
tcttccagctgccaagatgttaatggattcacatcaccctctccttgttcattttctgtc
caaagcaaaacccttcagagcaaatctttgttgaattcctactactcagtatcatcagac
acagttccatcgaccacactgttagacagtagccatggagagatgactcagccaaccttg
actatccagacccacccgtatcggagctgcgagccagtggaaatgtcctacccacggggg
cagttccagccagccatccgagtggccgacctgctgcagcacatcacccagatgaaacgt
ggacagggctatggatttaaagaggaatatgaggcattacctgaggggcagacggcatcc
tgggatacagccaaggaagatgaaaatcgcaataagaatagatatggaaacataatctcc
tatgatcattcaagagtgagattgcagctgctggatggggaccctcactctgactacatc
aacgccaattacatagacgggtaccaccggcctcgtcattacattgcaactcaagggccg
atgcaagagacagtgaaggatttctggagaatgatttggcaagaaaactctgcaagcgtt
gtcatggtcaccaacttggtggaagtgggcagggtgaagtgtgttcggtactggccagat
gacacagaggtctatggggacattaaagtcacattaattgagacagaaccactggcagag
tatgtcatacgcacatttactgtacaaaagaaaggctaccatgagatccgagagattcgg
cagttccacttcaccagctggccagaccacggggttccttgctatgccacgggcctcctg
ggctttgttcggcaagtaaagttcctcaaccccccagaggcaggacccatcgttgtgcac
tgcagtgctggggctgggagaacagggtgcttcattgccattgacatcatgcttgacatg
gcagagaacgaaggtgtggttgatatatttaactgcgtgcgagagctgcgctcccagagg
gtcaatttggtgcagacagaggaacagtatgtgtttgtccatgatgccattttggaggcg
tgtctctgcggcaacacggccattccagtttgtgagttcagatccatatattacaacatc
agcaggatagatccacagaccaattccagccagataaaagatgagtttcagactctcaat
attgtgacaccgcgggttcggccagaggactgcagcatcggccttttgccgaggaaccat
gacaagaaccgctgcatggatgtgctgcccttggaccggagcctgcccttcctcatctct
gtggatggcgaatccagtaactacatcaatgctgcgctcatggatagccacaagcaacct
gctgcctttattgtaacccagcaccctttgcccaacaccgtagcagacttctggaggctg
gtgtttgattataactgctcctccgtagtgatgctgaatgagatggatgctgcacagctc
tgtgtgcagtactggccagagaagacgtcctgttgctatggcccaattcaagtagagttt
gtttcagcagacatcgatgaagacatcatcaaccggatattccggatctgcaacatggcc
aggccccaggatggctatcgcatcgttcagcacctgcagtacattggctggccagcatac
cgggacacccctccatccaaacgctcactgctgaaggtggtcaggaggctggagaagtgg
caggagcagtacgatgggagggacggccgcactgtggtccactgcctgaacggtggggga
cgaagtggcaccttctgtgccatctgcagtgtgtgtgaaatgattcaacagcaaaatatc
attgacgtgttccacatagtgaaaacgttacggaataacaagtccaacatggtggagtca
ctggaacagtataaatttgtatatgaggttgcactggaatacttgagctccttttag
DBGET
integrated database retrieval system
