Lagopus muta (rock ptarmigan): 125701517
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Entry
125701517 CDS
T09141
Symbol
SMPD4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00600
Sphingolipid metabolism
lmut01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
125701517 (SMPD4)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
125701517 (SMPD4)
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GFIT
Motif
Pfam:
mit_SMPDase
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
125701517
NCBI-ProteinID:
XP_048819587
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Position
17:4373362..4389576
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AA seq
827 aa
AA seq
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MAGPYLQQPSFLLATLKADCVNKPFAQRCHDLETVIEEFPAKELHGIFPWLVESIFGSLD
GIIVGWNLRCLQGRTNPTEYSAALDFLDPSGPMMKLVYKLQAEEYRYDFPVSYLPGPVKA
SIQEQVLPECSLYHNKVQFTSSGGLDLNLALNPFEYYMFYFAISLITQKNSPITQHISPS
NSAYFILVDTYLKCFLPTEGSVLPPPSSNPGGAIPSPAPRTPAVPFTSYGMHHTSLLKRH
IAHQPSVNADPASQEIWRSETLLQIFVEMWLHHYSLEMYQKMQSPHVKLEVLHYRLSISS
KHHGSPAHSSYQALHAYQESFKPTEEHVLVVRLLVKHLHAFSNSLKPEPLSPSAHSHTAS
PLEEFKRVVIPRFVQQKLYIFLQHCFGHWPLDASFRAVLEMWLSYLQPWRYAPEKPPQTA
ELLPRSVSEKWAAFIQENLLMYTKLFVGFLNRTLRTDLVSPKNALMVFRVAKVFAQPNLA
EMILKGEQLFLEPELVIPHRQHRLFMTPTLGGSFLSSWPPTITDASFKVKSHVYSLEGQD
FQYKQMFGTEVRNLVLKLAQLICQAQQTAKSISDHSAETTASHSFFSWFKFTPSEMNGSY
TGNDLDEIGQDSIKKTDEYLEKALEYLCQIFKLNEAQLTQMMMKCGTAQDENGKKQLPDC
IESEDGLILTPLGRYQMINGLRRFDVQYQGDTELQPIRSYENATLVRLLYRLSSALNERF
AEQMEVLCSREDFIGRFCCYHLTNPHFVHKIRYSPVLKDRTNRNWGPRISLRFLASYRTL
ISLLMLYFIASWFYIGPVGCTFIILFSYFLYAVIMTFFFEGRKPHEH
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggctggcccgtacctgcagcagcccagctttctgctggccacgctgaaggcggactgt
gtcaacaaaccgtttgctcagaggtgccacgatctggaaacggtgatagaggagtttcct
gccaaggaactacatggcattttcccgtggttggtggagagcatttttggtagcctggat
ggcatcatcgtgggctggaaccttcgctgtttgcaaggaagaacaaatcctactgagtat
tctgcggctttggatttcctggatcccagtggtccaatgatgaagcttgtttacaagctc
caagcagaagagtacagatacgatttccctgtctcttatcttccaggtcctgtgaaagca
tcaatacaagagcaggttctaccagaatgctccttataccacaacaaagtccagttcacc
tcatctggtggtttagatttgaatttggctctaaacccatttgaatattacatgttttat
tttgcaatcagtttgattacacagaagaactcacccatcacccagcatatcagcccttcc
aacagcgcttatttcatcttggtggacacgtacctcaagtgtttcctacccacagaagga
agtgtccttcctccaccttcttcaaaccccgggggagccatcccttctcctgctcccagg
actccagctgtgcctttcacttcctatggcatgcatcacaccagcttgctgaaacggcac
attgcccatcagccttctgtgaatgctgacccagcttcccaggagatatggagatcagaa
acactacttcagatctttgttgaaatgtggcttcatcattattccctggaaatgtatcag
aaaatgcagtcccctcatgtcaagctggaggttctccactaccgactcagtatctccagt
aaacaccacggtagtcctgcccactccagctaccaggccctccacgcataccaagaatct
tttaagcccactgaagagcacgtgctggtggtaagactgctcgtgaaacatctgcatgct
ttcagtaacagcctgaaaccagagcctctctccccttcggcccattcccacacagccagc
ccgctggaagagtttaaaagggttgtgattcctcggtttgtccagcagaaactttatatc
tttctgcagcactgctttggtcactggccactggatgcctctttcagagcggttcttgag
atgtggttgagttacttacagccatggaggtatgctcctgaaaagccacctcaaactgca
gagctcttgcctcgcagcgtgtcagagaaatgggctgccttcattcaagaaaatctactt
atgtatactaagctgtttgtaggatttttgaacagaactcttcgaacagacttggtcagc
ccaaaaaatgctctgatggtgttccgagtagccaaggtctttgctcagcccaacctagct
gaaatgatcttgaaaggagaacagttattcctggagccagaacttgttattcctcatcgt
caacaccgactttttatgactcccacacttggtggaagcttcttgtcatcgtggcctcca
actattacagatgcctcatttaaggtgaagagtcacgtttacagcctggaaggacaggac
ttccagtacaaacagatgtttggcacagaagtcaggaacttggtgttaaaactggctcag
ctgatctgccaggcacagcagacagcaaaatccatatcagaccattcagcagagacaaca
gctagccattccttcttttcatggtttaagttcacaccatctgagatgaacggttcctac
actggcaatgaccttgatgaaattggacaagacagcatcaaaaaaacagatgaatattta
gaaaaggcactggaatacctatgtcaaatctttaagctgaatgaagcccagctgacccag
atgatgatgaagtgtgggacggctcaagatgagaatggaaaaaaacagcttccagactgc
attgaaagtgaggatggcctcattcttacaccccttggtcggtaccagatgataaatggc
ttacgtagatttgatgtgcagtatcaaggggacactgagcttcagcccatacgcagttat
gaaaacgccactcttgtccgcctcctgtatcgtttatcctcagcactcaatgaaaggttt
gctgagcagatggaagtgctttgctccagggaagattttattggcagattttgttgctac
catcttacaaaccctcacttcgtacacaaaatcaggtacagtcctgtgctgaaggacaga
acaaaccggaactggggaccaagaatcagtctgaggtttctggctagctacaggaccctt
atttccttgctaatgctgtacttcattgcatcctggttttatattgggccagtgggctgc
acgttcattatcctcttcagctattttctttatgctgtaataatgactttcttctttgaa
ggacggaaaccacatgaacactga
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