Lagopus muta (rock ptarmigan): 125701546
Help
Entry
125701546 CDS
T09141
Symbol
DEPDC5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
125701546 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125701546 (DEPDC5)
Membrane trafficking [BR:
lmut04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
125701546 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
125701546
NCBI-ProteinID:
XP_048819673
LinkDB
All DBs
Position
17:3825976..3868039
Genome browser
AA seq
1602 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYEAKCIDEFPETHRA
SIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPPGFNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRCGPGDSRLGDDYNIPHWINHSFYTSKSQLQCNSFT
PRIKLAGRKPLIEKTKNSRDASLGAPKDAENALPIQVDYDGYDAQVFRLPGPSRAQRCTT
FSRSVRERESRTRKSSSSYDVSCSPSLQSRTLPPEEVRSQASDDSSLGKISNILMIPRPH
LHQYEVSSSLGYTSTRDALDNMLESQQRDSSAPGRFHVGSAESMLHIRPGGYTPQRALIN
PFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQDSGQQDLTHSSAELL
ELAYHEAAGRHSTSRHPGDGASFLSFSGTEEYSNGLAGSNGAGMNLKTQNKDSSEDAVSN
SPDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLP
EADMDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQSKPQKPATTVPPPLSSSPLYSRG
LVSRNRPEEEDQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHSDS
EFVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACISATKRI
MEGEVHCDVYGDKPRSDEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGSAMKGLQIAG
PLPTHSLEQPGPPIGKKGTSALSALLEMEANQKSLGEQQAAMLSGKSSGQPSESGSIAIT
PTYMDSPRKDGAFFMDFVRSPRSASTFFSQVSIDQSVPGTSDANTLINTGQSAERGSTQS
LGSSQSTTDQGYVTAGAAEGSSQQCSVSSLTSSSTLMEILEAMKHPTTGIQLLSEQKGLS
PSCFISAEVVHWLVNNVEGVQTQAMAIDIMQKMLEEQLIVHASGEALRTFIYGFYFYKIV
VDKEPDRVGMQQPAMWHTAAMDDFSAFQRKWFEVAFVAEELLHSEIPAFFLPWLPSRPAS
YASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNA
AFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIP
LNVSCLLKEGSEHLFDGFEPETYWDRMHLLQEAIAYRFGFVQDKYSASAFNFPAENKPQY
IHVTGTVFLQLPYSKRKFSCGQQRRRRNSTSSTNQNMFCEERIGYNWAYNTMLTKTWRSS
ATGDEKFADRLLKDFTDFCWNKDGRLVLFWTDCLDKMHASAP
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaaggtgtacaagctggtcatacacaagaagggctttggaggcagtgat
gatgaactggtggtgaatcctaaagtatttcttcaaatcaagctgggagatgttgtggaa
attgcacatccaaatgatgaatacagccctctgctcctgcaagtgaaatcactgaaggaa
gacttgcagaaagaaacaataagtgtggatcagactgttgcacaggttttccgactgcgg
ccgtaccaggatgtccatgtgaatgttgttgacccaaaggaagtgaccttggacttggtg
gaactgacttttaaagatcagtatattggccgtggggatatgtggcgactgaagaaaagc
ttggtcagcacctgtgcatatgttacccagaaggtggaatttgcaggtatcagggcacaa
gcaggtgaactgtgggttaagagtgagaaagtcacttgtggatacatcagtgaggacaca
cgggtggtcttccgctccacttctgccatggtttatattttcatccagatgagctgtgaa
atgtgggattttgacatctatggggacttgtactttgagaaagctgtgaatggtttcctt
gctgacctcttcacaaaatggaaggagaagaattgtagccatgaagtgacagtggttcta
ttttctagaacgttttatgaagcaaaatgtatagatgagtttcctgaaacacatcgtgca
tccatccggcaggatcacgaggggaggttttatgaagatttttacaaagttgtagttcag
aacgagagacgagaagagtggacctcattgcttgtgaccattaaaaagcttttcatccag
tatcctgtgctggttcgactggagcaagcagagggctttcctccaggtttcaattctaca
tcagcacaagggaactacttggaggccataaatctttcattcaatgtgttcgacaagcat
tacataaacaggaactttgatcggactgggcagatgtcagtggtcatcacccctggcgtg
ggtgtgtttgaagtcgatcgcctccttatgattctgaccaagcagcggatgatagacaat
ggcattggtgtggacttggtatgcatgggagagcaaccattgcatgctgtgccgctcttt
aagctccataatcgctgtggacctggggattccaggctgggtgatgactacaacattcca
cactggataaaccatagtttctacacgtccaaaagccagcttcagtgtaacagcttcact
ccacggatcaaactggcaggaaggaaaccactgattgagaaaacaaaaaatagccgagat
gcctcattaggagctccgaaagatgctgagaatgccctgcccatccaggttgattacgat
ggctatgatgcccaggtgttcagactgccaggtccatccagagctcaacgctgcaccact
tttagcagatccgtgagggagagagaaagtcgtaccagaaagagctctagttcctatgat
gtctcatgcagcccttctctgcagagccgcacgctgcccccagaggaggtgaggagccag
gcttctgatgacagctcactgggcaagatctccaacatcctgatgatcccacggcctcac
ctgcatcagtatgaagtcagcagctctttgggctataccagcaccagagatgcccttgac
aacatgctggagtctcagcagcgtgactccagtgccccagggaggttccacgttggcagt
gcagaatccatgctacacattcggcctgggggatacacaccccagagagcactgatcaat
ccgtttgctccatcacgcatgcccatgaagcttacatctaacaggaggcgctggatgcac
acttttcctgtgggtccatcaggagaagctatccagattcatcaccaaacccgacagaat
atggcagaaatgcaggacagtgggcagcaggatttgacacactcctctgctgagctgctg
gagctggcttatcacgaggcagctggcaggcacagcacttctcggcatccaggtgacggt
gcctccttcctgagcttcagtggcacagaggagtattccaacggtctggctggcagcaat
ggtgcagggatgaacctcaaaactcagaacaaggattcatcagaagatgctgtctctaac
tctccagatccaattctgacactgtctgctccccccgtagtgccaggcttctgttgtaca
gttggagtggactggaaatctctcactaccccggcgtgtctccctcttaccactgactac
ttccccgaccgccagagcctgcagaatgactacactgagggctgctatgatctgctccca
gaagctgacatggacaggagagatgaggaaggagtgcagatgacagcccagcaggtgttt
gaggagtttatttgtcagcgtctcatgcaaggctatcaaattatcgtgcaatctaaacca
cagaagccagccacaactgtgccacccccgctcagcagcagtcccctttacagtcgaggc
cttgtttcaagaaatcgacctgaggaagaagatcagtactggctgagcatgggccgtact
ttccacaaagtgacattaaaagacaaaataattactgtgactcgatatctgcccaagtat
ccatatgaatctgctcagataaactacacttacagcttgtgcccctctcattctgactct
gaatttgtctcttgctgggtagagttttcccacgagagattagaagaatacaagtggaat
tacttggatcagtatatctgctctgctggctcagaggatttcagccttattgaatcactg
aaattttggaggactcgctttctccttctgcctgcctgcatcagtgccacaaagcgtatt
atggagggagaagtgcactgtgatgtgtatggagacaagccccgttctgatgaggaggag
tggcagctcctcgatggcttcattcgctttgtggaaggtttgaaccgcattcgtcgccgc
catcgatccgatcgaatgattcggaaagggtctgccatgaaaggcttgcagattgctggt
ccgctccccacccactctctggagcagcctgggcctcccattgggaagaaaggaacctca
gcactctcagctctgctggagatggaagccaatcagaagagtctgggggagcagcaggca
gcaatgctctctgggaagagctctgggcagccttcagagagtgggagcattgctatcaca
cccacctacatggacagccctcgtaaggatggggccttctttatggattttgttcgcagc
cctcgctcagcttcaactttcttctcacaggtctctatagatcaatcagttcctggaacc
tcagatgccaatacattgataaacacagggcagtcagctgagaggggcagcactcagagc
ttgggaagttcccagagcacaacagaccaaggatatgtaacagctggtgctgcagagggc
agctctcagcagtgctcagtaagctctctgacttcgtcctccaccttgatggagattctc
gaagccatgaaacatcctaccacagggatccagctgctctctgagcagaagggcctctct
ccatcctgtttcatcagtgcagaagttgtgcattggttggtgaataacgtggaaggtgtg
caaacccaagccatggcgattgacataatgcagaaaatgctggaagagcagctgattgtc
catgcatctggagaagctttacgaacctttatttatggcttttatttttacaagatcgtt
gtggacaaagaacctgaccgagtgggcatgcagcagcctgccatgtggcacacagctgcc
atggatgacttctctgccttccagaggaaatggtttgaggtggcctttgtggcagaagag
ctcctgcactcggaaatccccgcgtttttcctgccctggctgcccagccgcccagcctcc
tatgcaagtaggcacagttcctttagccgcagtttcggaggacggagccaggcagctgca
ttattagctgctacagtgcctgagcaacggacggtgacacttgatgtggatgtgaataac
cgcacggaccggctggagtggtgcagttgttactatcatggcaatttctccttgaatgct
gcctttgaaatcaagttacactggatggcagtgactgcagctgttctttttgagatggtt
cagggttggcatcggaaagccacatcctgtggattccttctggttccagtcctggaaggc
ccctttgctttgcccagctacttgtatggagacccacttcgagctcagctgttcatccca
ctcaatgttagctgcttgctgaaggagggtagtgagcacttgtttgatggctttgaacca
gaaacatactgggaccgtatgcatctcctgcaggaagcaatagcatacagatttggattt
gtgcaggataaatactcggcttctgcattcaactttccagctgagaacaagcctcagtat
atccatgtcacagggacagtgtttttgcagctgccatattccaagaggaaattttcttgt
gggcagcagcgacgccggcgcaactccaccagctccaccaaccagaacatgttctgtgaa
gagcgcattggctacaactgggcctacaacaccatgctgaccaaaacgtggcggtccagc
gccaccggggacgagaagtttgctgatcggctgctgaaagacttcacagacttctgctgg
aacaaagacggccggctcgtgctcttctggaccgactgcctggataagatgcatgccagt
gctccgtga
DBGET
integrated database retrieval system
