Lagopus muta (rock ptarmigan): 125701591
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Entry
125701591 CDS
T09141
Name
(RefSeq) protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125701591
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
125701591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
NBCH_WD40
HIRA_B
WDR90_beta-prop_4th
Ribonuc_red_lgC
WD40_like
Motif
Other DBs
NCBI-GeneID:
125701591
NCBI-ProteinID:
XP_048819811
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All DBs
Position
17:12007261..12034496
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AA seq
1023 aa
AA seq
DB search
MKLLKPTWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMAPVLKEEDEKNENIP
KMLCQMDNHLACVNCVRWSNNGVYLASGGDDKLIMVWKRAAYIGPSTVFGSSSKLTNVEQ
WRCVSILRSHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLKGHSGLVKGL
TWDPVGKYIASQADDRSLKVWRTMDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSTKSSCPYCCC
AVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLDFSQD
ELGDPLSEEEKSNIHQSTYGKSLAIMTEAQLSTTIIENPEMLKYQQRQQQQQAEQKNASM
REASGAAATAPKVASMVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFST
AFFNSIPISGTLAGSIMSSQNNQQLMSLDSNAANSLNTSKPSAEPTAASIKPTDDAANKD
GVNATSVSTAPPASSSSVLTTPSKIEPMKAFDSRFTERSKATSGTAVITNTNQTVVDRLK
DQNLIKDNKPKDILESSSDSEEKIPAAKPLSAPKRKLELEGETVEKKKKGRPRKDSRLVP
VTLTVQSPAALASEKDAACISAPALALKLPTPIPQKSFTLQVSSDPSMYLEVENEMTTVG
GSKLSRLKCNREGKEWETVLTSRILTAAGSCEIVCVACEKRTLSVFSACGRRLLPPIILN
TPISTLHCTGSYIMTLTTAATLSVWDVHKQTVIVRDESLQTILSGSDTTVSQILLTQHGI
PVMSMSDGKAYCFNPSLSTWNLVSDKQDSLAQCADFRSSLPSQEAMLCSGPLAVIQGRTS
NSGRQAARLFSMPHLVQQETTLAYLENQIAAALTLQSSHEYRHWLLIYARYLVNEGFEYR
LRELCKDLLGPVHYSAGSQWESTVMGLRKRELLKELLPVIGQNLRFQRLFTEYQEQLDIL
RDK
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctgaagccgacctgggtcaaccacaatggaaagcccatattttcagtggac
attcacccagatgggaccaagtttgcaacaggaggacaaggtcaggattctgggaaagtt
gtgatctggaatatggctcctgtcctgaaagaggaagacgaaaagaatgaaaatattccc
aagatgctttgtcagatggacaatcacttagcttgtgtgaactgtgtacgatggtcaaac
aatggagtttacttggcttcaggaggagacgacaaactgatcatggtgtggaaacgagcc
gcgtacattggacccagcactgtgtttggttctagcagcaaactaactaatgttgagcag
tggaggtgtgtatcaattctcagaagccattcaggggatgtcatggacgtagcatggtct
ccacatgatgcttggctggcatcctgtagtgtggataacactgttgtcatctggaacgct
gtcaaatttccagaaattcttgccactttgaaaggacattctggcttggtgaaagggctg
acctgggatcctgttggaaaatatattgcctctcaggctgatgatcggagtttgaaagtg
tggcggacaatggactggcaattggaaactagcatcacaaaaccctttgatgagtgtgga
gggacaacacacgtcttgcgtctcagctggtcacctgatggtcactatcttgtttctgct
cacgccatgaataattctggacctactgctcagatcatcgagagagatggatggaaaacc
aacatggattttgtggggcatcggaaggcagttacggtagtgaaattcaatccaaaaatt
ttcaagaagaagcaaaagaatgggagctctaccaaatcaagctgtccctactgctgctgt
gctgttggcagtaaggatcgatctctttctgtctggctcacgtgtctgaaaagaccttta
gttgtcatacatgagctgttcgacaagtctatcatggatatctcctggaccctcaatgga
ctcggtatcttggtgtgttccatggatggatctgtggcgtttttagacttttcccaggat
gaacttggagatccactcagtgaggaggaaaagagcaacatccatcagtccacgtatggt
aaaagcctagctataatgactgaagctcaattgtctacaaccatcattgagaatccagag
atgctcaagtatcagcagaggcagcagcagcagcaggcggagcagaagaacgcatcgatg
agggaagcatctggggctgcggccacagctcccaaagtggcaagcatggtcaatggggag
agcttagaggacattagaaagaatctcttaaaaaagcaagttgaaacacgaacagcagat
ggccggaggaggatcacacctctctgcatagctcagctggacactggggatttttctaca
gcatttttcaatagcatcccaatatctggcacactggctggctcaataatgtcttctcaa
aacaaccagcagctcatgtcattagattctaatgcagcaaattcacttaatacttcaaag
ccttctgcagagccaacagcagccagtataaaaccaacagatgatgcagccaataaggat
ggtgtaaatgctacctctgtttcaactgctcctcctgcatcatcttcctctgtactgaca
actccatccaagattgaacctatgaaagcatttgattctagatttacagaacgatccaaa
gccacctcagggactgctgtcataacaaatacaaatcagactgttgtggacagactgaag
gatcagaatttaattaaagacaataagcccaaggatattctggagagtagcagtgacagc
gaagagaagattccagctgctaaaccactcagtgcacccaaacgaaagctggaacttgag
ggagaaacggtagaaaagaagaaaaagggaagacctcgaaaagactccagacttgtacca
gtaactttaactgttcagtccccagctgcactggcttctgaaaaagatgctgcatgcatc
tctgcaccagcattagcacttaagctgccaaccccaatcccacagaaatcatttactttg
caagtaagttcagatccatccatgtaccttgaagtggagaatgaaatgaccacagtggga
ggttccaagctgagcaggttgaagtgtaatcgggaaggaaaggaatgggagacagtcctc
accagtcgaattctcacagcagcaggaagctgtgagattgtctgcgtagcctgtgagaaa
cgaacgctgtcggtattttcggcttgtggtcgccgccttcttccccccataatactgaat
acgcccatttccaccctgcattgcacaggttcttacatcatgactctcaccaccgctgct
acgctctctgtttgggatgttcacaagcagacagttattgttagagacgagtctttgcaa
acaatattatcaggaagcgatacaaccgtgtctcagatcctgctgactcagcacggcatt
cctgtgatgagcatgtctgatgggaaggcgtactgctttaatccttctctctctacatgg
aatcttgtttctgacaaacaggactccttggcgcaatgcgcggacttcaggagtagttta
ccatcccaagaagccatgttgtgttctgggcccttagctgtaatacagggacgaacatcg
aattcaggaaggcaagctgccagattgttctccatgcctcacttagtgcagcaagaaaca
acgcttgcatacctggagaatcagatagcagcagcgcttacgttacaatccagtcacgaa
tatcgccactggctccttatctatgcacggtacctggttaatgaagggtttgaatatcgt
ttgcgagaattatgcaaggatttgctgggtccagtccattactcagctggaagtcaatgg
gaatcaacagtaatgggtttacgaaagagagaactattgaaagaacttcttcctgttatt
ggacagaacctccgcttccagaggcttttcacagaatatcaagagcagctagacatcttg
agagacaagtag
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