Lagopus muta (rock ptarmigan): 125701671
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Entry
125701671 CDS
T09141
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125701671 (SBNO1)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125701671 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
125701671
NCBI-ProteinID:
XP_048820009
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Position
17:complement(7660448..7689335)
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AA seq
1404 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDSPDVVLATPTPAVQQSVPLSALDLGLETEASAA
VKQEPETVSTPALLNVRQPPSTTTFVLNQINQLPTLGTTIVMTKTTPVTTTRQTITVAKI
IQTSTTTRPSVAAPAVRNALTTAPSKDQIQLKDLLKNNSLNELMKLKPPPNIAQPVATAA
KIIVVPPKVVNATSPADLSNGAVKKEASTKEVARIWINDVKMRSFSPTMKVPAVKEEEEP
EEEDEEEMGHAETYAEYMPIKLKIGLRHPDPVVETSSLSSVTPPDVWYQTSISEETIDNG
WLSALQLEAITYAAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRAVW
FSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGES
QSGGKYKTRLKQLLHWCGEDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPK
ARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLR
GMYIARQLSFSGVTFKIDEVLLSQEYVKMYNKSVKLWVSARERFQQAADLIDAEQRMKKS
MWGQFWSAHQRFFKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGG
ELNDFVSTAKGVFQSLIEKHFPAPDRKKLFSLLGIDLTAQSNNNSPRDSPCKENKIKKRK
GEEVSREAKKARKTGGLAGSSSDESESESDASDNEESDNESSRFLSSGDDDDFNPFRDES
SEDDEDDPWLIRKEHKKIKEKKKKKSIDPDSIQSALLASGLGSKRPSCFTSTVGTTTSST
NTSANSNTNSSFVTSQDAVERAQQMKKELLDKLEKLAEDLPPNTLDELIDELGGPENVAE
MTGRKGRVVSNDDGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQ
ADRRAKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIV
AKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDFPG
DFFKDVRQGLIGVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFSDTL
NAVIQNAKKNGRYDMGILDLGSGDEKVRKADVKKFLTPGYSTSGHVELYTISVERGMSWD
EATKIWAEQTGPDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLETCAD
LKKKYKKVPSEDALPHWLEQYNSSADTCTHAYWRGNCKKAGLGLVCEVGLRCRTYYVLCG
SVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQ
QLAVQQQQIWQQHHPQSITNFNNA
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccaggacaagatctgttgcttgctgctttgagtgagagtggaatcagtccc
aatgatctgtttgatatcgactctccggacgtggttcttgcaactccgactccagctgtc
cagcagtcagtgccacttagtgcgttagatctagggttggaaactgaggcctcagctgct
gtgaaacaagaaccagagactgtatcaactccagccttattaaatgttcggcaaccacca
tccaccacaacctttgtgctgaatcaaataaatcagcttccaacgttggggactacaata
gtgatgacaaaaacaacgccagttacaactacgaggcagactattactgtagcaaaaatc
attcagaccagcacaactactcgaccctcggttgcagcaccagcagtacggaatgccttg
accactgcaccttcgaaggaccagattcagctgaaagatttgctgaagaataacagtctt
aatgaactgatgaaattgaagccacctcctaatattgcccaaccagtagcaacagcagca
aaaataattgtagttccgcctaaggtggtaaatgccaccagcccagctgatctaagcaat
ggtgcggtgaagaaggaggcttctacaaaagaggtagcgagaatatggataaatgatgtt
aaaatgagaagtttttcacctactatgaaagttccagctgtaaaagaggaggaggaacct
gaggaggaagacgaggaagaaatgggccatgcagaaacttacgcagagtatatgccaata
aaattgaaaattggtctgcgtcatcctgacccagtagtggaaaccagttcgttgtccagt
gtaacccctcctgatgtgtggtaccagacgtcgatatcagaagagaccattgataacgga
tggttgtcagctttgcagcttgaagcaatcacttatgcagcccagcaacatgaaacattc
cttcccaatggagacagagctggattcttgataggtgatggtgctggtgtaggaaaagga
aggaccatagctgggatcatctatgaaaattacttgttaggcagaaaacgagcagtctgg
tttagcgtgtcaaatgatctgaaatacgatgctgaaagagatttgagagatattggagca
aaaaacattttggttcattcactaaacaagttcaagtatgggaaaatttcttctaaacat
aacggaagtgtgaagaagggggtcatctttgccacgtactcttctcttattggtgaaagt
cagtctggtggtaaatacaagaccagattaaagcagcttcttcactggtgtggtgaagat
tttgatggcgttatagtatttgatgagtgtcataaagccaagaatctctgtcctgttggt
tcatcaaagccaacgaaaactggtctggctgtattggaacttcaaaataagcttccaaaa
gctcgggttgtttatgccagtgccacaggtgcgtctgagccaaggaatatggcgtacatg
aaccgtcttggaatatggggtgaagggactccatttagggaattcagtgatttcattcag
gctgttgaaagaagaggtgttggtgccatggagatagttgctatggatatgaaactgaga
ggaatgtacatagcaagacagttgagcttttcaggtgtaaccttcaaaattgatgaagtc
ctgctctcacaggaatacgttaaaatgtacaataaatctgtgaaactgtgggtcagtgct
agagagaggttccagcaagcagcggatctcattgacgcagagcagcgaatgaagaaatcc
atgtggggtcagttctggtctgctcatcagaggtttttcaagtacctttgcatagcatct
aaggtgaagagggtggtgcagcttgctcgggaagaaatcaagaatgggaaatgcgttgtt
atcggcctgcagtcaacaggagaagcaaggacattagaagctttggaagaaggaggtggt
gaactgaatgactttgtttctactgcaaagggagtattccagtctcttattgaaaagcac
tttccagctcctgacaggaagaagctttttagcttgttgggaattgacttgactgctcaa
agcaacaacaattcacccagagacagcccctgcaaggagaacaaaatcaagaaacggaaa
ggtgaagaagtaagcagagaagccaaaaaggctcgtaaaacaggtggccttgcaggtagc
agctctgatgagagtgaaagtgagtctgatgcttcagacaatgaagaaagtgacaatgag
agctccaggtttctcagttctggagatgatgatgacttcaacccattcagagatgaatcc
agtgaggatgatgaagatgatccctggttaattagaaaagagcataaaaaaattaaagag
aagaaaaagaagaagagtatagatcctgattctattcaaagtgccttattagcttctggt
cttggctcaaaacgacctagctgctttacttccactgttggcaccaccacttctagcacc
aacacatcagcaaacagtaacacaaacagcagctttgtaacaagtcaagatgctgttgaa
agggcccaacaaatgaagaaagaactgcttgataaactggaaaagctggctgaagatctt
ccaccaaatacactggatgagcttatagatgaactgggtggtcctgaaaatgttgcagag
atgacaggccgcaaaggaagagtggtgagcaacgatgatggcagcatatcttacgagtca
aggtctgaacttgatgtgcctgttgaaattctgaacatcacggaaaagcagaggttcatg
gacggagataagaacattgccataatctcggaggctgccagctctggtatctcactgcaa
gcagaccgtagagctaagaatcagaggcggagagttcacatgactctggagctgccgtgg
agcgcagacagagcaatacagcagtttggaagaactcatagatccaaccaagtgactgct
ccagagtatgtgtttctaatttctgagttggctggagagcagagatttgcatctatagtt
gcaaaaagactggaaagcttgggagcccttactcacggtgaccggcgggctacagaaact
cgagacctcagcagattcaattttgacaataagtatggcaggaatgctttagagattgtt
atgaaatccattgtgaatttagacagcccgatggtctcaccacctcctgattttcctgga
gacttcttcaaagatgttcgtcaaggattgattggtgtagggctgataaacgtagaagac
agatctggaattttaactcttgataaagattataacaacataggaaaatttctgaacaga
attcttggtatggaagtacatcagcagaatgctttgttccagtacttctccgacacatta
aatgcagttattcaaaatgcaaaaaagaacggaagatacgatatgggcatcttagatttg
ggctctggcgatgagaaagtaaggaaagcagatgttaagaagtttttaactcctggatat
tctacctctggacatgtagagctgtacacaatcagtgtggagagaggaatgtcttgggat
gaagcaactaagatctgggcagagcagacaggtccagatgatgggttctatttatcgctg
cagataagaaataacaagaaaacagctattttagtgaaagaagtgaatcctaaaaagaag
ctttttttggtatacagaccaaatactgggaaacaactcaaactagaaacatgtgcagac
ctgaaaaagaaatataagaaggtaccttctgaagatgctctgccacactggttagagcag
tacaactcttctgcagacacctgcacacatgcttactggagaggcaattgtaagaaggca
ggcttgggattggtttgtgaagtgggactccgctgtcgaacttactatgtcttgtgtggt
tcagtattgagcgtgtggacaaaagtagaaggcgttctagcctctgtgagtggtacaaat
gtgaagatgcagatagttcgtctaagaactgaagacgggcagaggatcgtaggcttgatc
attcctgcaaattgcgtgtcgccccttgtcaacctcctgtcaacatcagaccagtctcag
cagcttgcagtacaacagcagcagatatggcagcagcatcacccacaaagcatcaccaac
ttcaacaacgcgtaa
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