Lagopus muta (rock ptarmigan): 125701691
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Entry
125701691 CDS
T09141
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmut03041
]
125701691 (TFIP11)
Spliceosome [BR:
lmut03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
125701691 (TFIP11)
Other components
Complex C specific factors
125701691 (TFIP11)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
125701691
NCBI-ProteinID:
XP_048820054
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All DBs
Position
17:5541937..5549131
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AA seq
827 aa
AA seq
DB search
MSMSHLYGTDGEDGVEMESFEVSDWDLQNEFNPHRHRHRQTKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVNFISAGLKKSAAEDVSDEDSDEDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGTKSFTDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTSQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRINKQLSTPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDNPQQLLGKDS
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLSHEIQKMSEILSHEETAI
SNLSKVLDMVEECERRMQPSCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKDYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHGGQDLSTDAFHRLMWEIWMPYVR
NIVAQWQPRNCGSMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGVAASSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtctcacctgtacggcacggacggggaggatggcgtggagatggagagcttc
gaggtgtcggactgggaccttcagaacgagttcaacccgcaccggcatcggcaccggcag
accaaggaggaggccacttacggcgtgtgggccgagcgagactcggacgaggagcggccc
agcttcggcggcaagcgctctagggattactcagcccccgtgaacttcatcagtgcaggg
ctgaaaaagtcagcagctgaggatgtgtcagatgaggactctgatgaagatgagaagccc
gttaaacaggaggagatccctaaagaatttgtgccaaagaagttgaaaacaggtggaaat
ttcaagcccagtcagaaaggctttgtagggggcacaaaatctttcacggattttggcagc
tgggagagacacactaagggaattgggcaaaaacttctccagaagatgggttatgtccct
ggaagaggtcttgggaagaatgctcaaggtattattaatccaattgaggccaagcaaaga
aaaggcaaaggagctgtgggagcatatggctctgaaagaaccagccagtctttgcaagac
ttccctgttgttgactcggaagaagaagctgaggaggaatttcaaaaagaactcagtcag
tggcggaaggatcctaatggaggcaagaaaaagcccaaatacagctataagacagtagaa
gaactgaaagccaagggtaggattaataaacagctttcaacccctcagaaggagctctct
caagtcaaggttatagatatgacgggccgggagcaaaaggtttattacagctacagtcaa
attagccacaaacacaacatccccgatgacaatcctcagcagctgctgggcaaggactcg
aagccccagggatttgccctgcctgagctggagcacaacttacagcttctcattgacatc
acggagcaggagatcatccagagcgaccgtcagctgcagtatgagagggacatggtggtc
aacctaagccatgagatacagaagatgtctgagattctctcacacgaggagacggccatc
agcaacctcagcaaagtcctggacatggtggaggagtgtgagagacggatgcaacccagc
tgtgaaaatcctttgaccttggatgagtgtgccaagatctttgagacgcttcaagacaag
tactatgaagagtacagaatgtctgacagggtagacttggcagtagcaatagtctatcct
ctcatgaaagattacttcaagaactgggatcccctcaaggactgtacgtacggcactgag
attatagccaagtggaagagccttttggaaaacgaccagctcttatcacacggggggcag
gacctttcaacggatgcttttcacagattgatgtgggaaatctggatgccatatgtcaga
aacatagtggcacagtggcagccaaggaactgtgggtcaatggtggatttcctggatagc
tgggtacacatcattcctgtgtggatactggataacattctggatcagctcatcttcccc
aagctacagaaagaggttgaaaactggaatcctctgacagacacagtcccaatccattcc
tggatccacccctggcttcccctgatgcaggcacgactggagcctctttattctcccatc
agaaacaagctggcaaacgcactgcagaaatggcatcccagtgactcctcagccaaactt
atccttcagccctggaaggatgtgttcacacccgggtcatgggaggctttcatggtgaag
aacattgtgcctaaactcgggatgtgtttgaatgaacttataattaaccctcatcagcag
cacatggatgccttctactgggtgattgactgggagggaatgatttctgtttccagtctt
gttgggctgctggagaaacacttcttcccaaaatggctgcaggtgctgtgctcttggctt
agtaatagccccaattacgaggagatcacaaagtggtacttgggctggaagtccatgttc
tcagaccaagtgttggcacatccatcaatcaaagacaaatttaatgaagctcttgatatc
atgaaccgggctgtctcttccagtgttggtggctacatgcagccaggtgcccgggagaac
attgcatacctcactcacacagagaggaggaaagacttccagtacgaagccatgcaggag
cggcgagaggctgagaacatggctcagcgaggcataggggtggctgccagctctgtgcca
atgaattttaaggacctaattcagacaaaagcagaggaacacaacattgttttcatgcct
gtgattggaaagcggcacgaagggaagcagttatacacgtttggacggattgtgatttac
attgacagaggtgttgtatttgtacaaggagaaaagacctgggtgccaacctctctccag
agtctcattgatatggccaagtga
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