Lagopus muta (rock ptarmigan): 125701719
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Entry
125701719 CDS
T09141
Symbol
USP30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125701719 (USP30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lmut01002
]
125701719 (USP30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125701719 (USP30)
04121 Ubiquitin system [BR:
lmut04121
]
125701719 (USP30)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125701719 (USP30)
Peptidases and inhibitors [BR:
lmut01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125701719 (USP30)
Membrane trafficking [BR:
lmut04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
125701719 (USP30)
Ubiquitin system [BR:
lmut04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125701719 (USP30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
125701719
NCBI-ProteinID:
XP_048820095
LinkDB
All DBs
Position
17:complement(6052886..6061337)
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AA seq
502 aa
AA seq
DB search
MLPGGAVRRALRAGAGGRYRAMRSWGVIGGLAAAVAAGIYVLWGPIAERKKRRRGLVPGL
LNLGNTCFMNSLLQGLSSCPSFIRWLEEFTAQYKAEQNQPSEQQYLSLTLLHLLRALSCQ
EVTEDDVLDASCLLEVLRIYRWQISTFEEQDAHELFHVLTSSLEDERDRQPRVTHLFDVH
SLEQPEITQKQISCRTRGSLPPMSNHWKSQHPFHGRLTSNMVCKHCEHQSPVRYDTFDSL
SLSIPAAVWGHPMTLDHCLHHFISSESVKDVVCDNCTKIQAEGTLNGQSIENQKTTFVKQ
LKLGKLPQCLCIHLQRLSWSNQGTPLKRHEHVQFNEFLIMDIYKYHIPVHKSTQNDLNQK
SSEETKPGTRDGIAVKPSDAEQTCGTKSLLMNGACSSPLLMSSGTFPLAAFPECSPPVYL
YRLMAVVVHHGDMHSGHFVTYRRSPPSPKSPLSVSNQWLWISDDTVRKASLQEVLASSAY
LLFYERVHSRVQHQSLQLRPEE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccggcggcgccgtgcggcgggcgctgagggccggggcgggcggcaggtacagg
gcgatgcggagctggggggtgatcggggggctggcggccgccgtggcggcggggatctac
gtgctgtgggggcccatcgccgagaggaagaagcggaggagaggcctggtgcctggcctg
ctgaacctcggcaacacctgcttcatgaactccctgctgcaaggcctgtcttcgtgcccc
tcgttcatcaggtggctggaggagttcacagcacagtacaaggcagagcagaaccaaccc
agcgagcagcagtacttgtcgctcactctgttgcatctcctaagagctttatcctgtcaa
gaggtaacagaagatgatgtcctggatgcaagctgcttattagaagtgttaagaatttac
aggtggcagatctcgacatttgaagagcaggatgctcatgaactatttcatgtccttacc
tcttcattggaagatgaacgggatcgtcagccacgtgtcacacatttgtttgatgtgcat
tcattggagcagccagaaataacccaaaagcaaattagctgccgaaccagaggatctctt
cctcctatgtcaaatcactggaagtctcagcatccttttcatggaaggctgaccagcaac
atggtttgcaaacactgtgaacaccagagtcctgtgaggtatgacacatttgacagtctc
tccctgagtattccagcagctgtgtggggtcatcctatgacactggatcactgcctccat
cacttcatctcctctgaatctgtgaaggatgttgtgtgtgacaactgcactaaaattcag
gcagaagggactctgaatggacagagcatagaaaaccagaaaacaacatttgttaagcaa
ttaaagctagggaagctccctcagtgtttgtgtatccatctgcaaagactgagctggtca
aaccaagggactcctctgaaacgtcatgaacatgtacagttcaatgagttcctaatcatg
gacatctacaaatatcacattcctgttcataaatcaactcagaatgatctgaatcagaaa
agctccgaagagacaaagcctggaacaagggatgggatagcagtaaaaccttcagatgca
gagcagacatgtggtaccaaatctctccttatgaatggagcctgctcctctccactctta
atgtcctcgggaactttcccactcgctgcattccctgagtgcagtccccctgtgtacctg
taccggctgatggcggtggttgtgcaccatggagacatgcactctggacactttgtgact
taccgccgctctccgccttctcccaagagcccactctctgtcagcaatcagtggctatgg
atttcagacgatacggttcgcaaagctagcttgcaggaggtccttgcctctagtgcttac
ctgctgttctatgagcgtgttcactcaagggtacagcaccagagtttgcagttgaggcct
gaagagtga
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integrated database retrieval system
