Lagopus muta (rock ptarmigan): 125701898
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Entry
125701898 CDS
T09141
Symbol
MSI1
Name
(RefSeq) RNA-binding protein Musashi homolog 1
KO
K14411
RNA-binding protein Musashi
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125701898 (MSI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125701898 (MSI1)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125701898 (MSI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
125701898
NCBI-ProteinID:
XP_048820411
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All DBs
Position
17:complement(3353534..3381691)
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AA seq
351 aa
AA seq
DB search
METDGSQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFSQFGEVKECLVMRDPLTKRS
RGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNT
TVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASRSYTGIAPGYT
YQFPEFRVERTPLPSAPVLPELTAIPLTAYGPMAAAAAAAAVVRGTGSTPSRTGGFLGTT
SPGPMAELYGAANQDSGVSSYISAASPAPSTGFGHSLGGPLIATAFTNGYH
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggagacagacggcagccagcccggcctcgcctccccggactccccgcacgacccctgc
aaaatgttcatcgggggactgagctggcagaccacgcaagagggcctgcgggagtacttc
agccagttcggcgaggtgaaagagtgcctggtgatgcgggacccgctgacaaagagatcc
aggggcttcgggttcgtcacgttcatggaccaggctggcgtcgacaaggttctggcccaa
tccagacatgaactggactccaagacgattgacccgaaggtagcgttcccccgccgagca
cagcccaagatggtgacccgaacgaagaagatatttgtgggtggtctgtcagtgaacact
actgtggaggatgtgaaacagtattttgagcagtttgggaaggtggatgatgcgatgctg
atgtttgacaagacgaccaaccgacaccgagggtttggatttgtcacatttgaaagtgaa
gacattgtggaaaaagtatgtgaaatccacttccatgagattaacaacaaaatggtggag
tgcaaaaaagcccagcccaaggaggtgatgtccccaacaggctcagcgcgagggcggtcc
cgagtcatgccttacgggatggatgccttcatgcttgggatcggcatgctgggttatcca
ggcttccaagctgccacctacgcaagtcgaagttacactggcattgcacctggttacact
taccagttccctgagttccgtgtagagcggacccctctcccgagtgcccccgtcctccct
gagctcacagcaatccccctcactgcgtatggaccaatggcagcagcagcagctgcggca
gcagtggtgcgagggacaggttccacccccagtcgcaccggtggatttctgggcaccacc
agccctgggccgatggcagagctttatggagccgccaaccaggactcaggggtcagcagt
tacatcagcgctgccagtccagccccgagcactggctttggccacagcctagggggtccc
ttgattgcaacagcttttaccaatgggtatcactga
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