Lagopus muta (rock ptarmigan): 125701905
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Entry
125701905 CDS
T09141
Symbol
SETDB2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00310
Lysine degradation
lmut01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125701905 (SETDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125701905 (SETDB2)
Enzymes [BR:
lmut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
125701905 (SETDB2)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125701905 (SETDB2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
125701905 (SETDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-HC5HC2H
Pre-SET
MBD
zf-HC5HC2H_2
CEBP_ZZ
Motif
Other DBs
NCBI-GeneID:
125701905
NCBI-ProteinID:
XP_048820461
LinkDB
All DBs
Position
1:167322855..167359983
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AA seq
1123 aa
AA seq
DB search
MEGNRMFSLIPLLITANTPFGDKRFYFSSELILVHSAPLAVLRGCPEEKNRPTSRKGTAE
GDLKAFWTQLESRRVDLIFEQVQEVLLLLKEKIKNGTATNQECRQAWTLVNEADLGDLLT
LTNVNDVLDEGDTKEPKPKPQHPVRDDNSGNSVEGSHSKKEKIEKSDSGSEERSSEIHRA
PLNRRYRIHKCSSACLSNRAVSSYKGENPLKIPILFHFQRRHAKADCLSKSLDVHYKAPC
GRSLRSFQDVQNYLFETKCDFLFIDHFSFNTYVLLGRNIVNPEPLVFDLDISNGAESVPI
SFSNDIDRARLPYFKYRRASWPRGYYLNNLSSMFLDSCDCTDGCIDRSKCACLQLTARGC
RTKVSLSPNTKTSRGYSYKRLEGPVPSGIYECSVSCRCDKMMCQNRVVQHGIQVRLQVFN
TEKKGWGVRCLDDIDKGTFVCTYSGRLMSRAEVQELGGADQDSKEESAVNDREQSFLSKK
RKLDSSCSESEIELVHTGRDDMLEQQEPPCDNESESPLIHPRNLNTAAVRRLGTRIAVVD
NHQLKMEVDTLVHSASSDEDNVSQPQHSSKAELTSGTNKEKERSIQKQKEEDLVEVGQTE
PAEMGSAECKRKSLSVKAVACGRLDVLNDKCVVKPSTPQKANCKEEAHRQSKQGIFCVDA
DGDRTFLKNANDENIYVLDATKEGNVGRFLNHSCCPNLFAQSVFVETHNRSFPWVAFFTN
RHVKAGTELTWDYGYEVGSMPETEISCWCGVQKCRKKTLGLQPPTSASCQIPRAPRDTSS
NWEDQGLCICSDFRAQGCRRRRLRHLVHLTSWEWETEDFCCGLEGKTTNLPVPGALQTMA
KMVRRTCAFCSEGEAASIMYVAKEQNIAAHQSCLLFSSGFVESEEYNPENLDLRFDVESV
LNEFKRGKRLVCNFCRKKGATVGCEERACRRSYHYFCALCDDAATETDEVNGVYRVFCSK
HDPGNRTNHYDAANKRKRHASKSSTTTEQMRAEETAEENRLRILRRKSSRHKVRIDFLRK
CKQAGLLDDIFEEMLDTLHLAQEKLMDDNTSETEYEETVISLFDCGLFENILTNIHSGTE
EKIQELLESRKRLDNQIELLQELKEVSLPSQESTASTSSTVSE
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaaccgaatgttctcactgatacctctgctgataactgccaacacgcctttt
ggtgacaagcgtttttatttctcatctgaactcatacttgtccattctgcaccccttgca
gtgctgcgtggctgtcctgaagagaagaaccgtcccacttccagaaaagggacagctgaa
ggtgatttgaaggcattttggacacaactggaaagtaggagagtggatctcatatttgag
caggtgcaagaagtactgctgctgctaaaggagaagatcaagaatggaactgccacaaac
caagaatgccggcaggcttggacactggtaaacgaagctgatctgggtgatcttttaacg
ttgacaaatgtaaatgatgttcttgatgaaggggatacaaaggaacccaaacctaaacca
cagcatcctgttagagatgacaacagtggaaattctgtagagggttcgcacagcaaaaag
gagaagattgaaaaatcggactcagggagtgaagaaagatcgagtgaaattcatcgtgca
cctttgaatcgccggtatcggatccacaagtgctccagtgcgtgtctgtccaacagagca
gtgagctcctacaagggtgaaaatcctctgaagataccaatactgtttcactttcagaga
cgccatgcgaaagcagactgcctttcaaagtcactggatgtgcattacaaagctccctgt
ggcagaagtctgaggagttttcaagatgttcagaattatttgtttgagacaaaatgtgat
ttcttatttattgatcacttctctttcaacacatacgtcctgttgggcaggaacattgta
aatccagaacccctcgtgtttgatcttgatattagcaatggagctgaatctgtgcctatt
tccttctctaatgacattgaccgtgccaggttaccttatttcaaataccggagggcatcg
tggcctcgtggatattatctcaacaatttatccagcatgtttcttgattcatgtgactgc
acggatggctgcattgataggtccaagtgtgcatgtctgcagctaactgcaagaggctgc
cgtactaaagtttctctgtctcctaatactaaaacgtctcgtggatacagttacaaaaga
ctggaagggcctgttcctagtggaatttatgagtgtagcgtgtcgtgcagatgtgacaag
atgatgtgtcagaacagagttgtgcagcatggtattcaagttcggttgcaagtgttcaac
acagagaagaagggttggggtgtccgctgcctggatgacatcgacaaggggacgtttgtt
tgtacttactcaggcaggttaatgagcagagctgaagttcaggagttgggaggtgctgat
caagactcgaaagaggagagcgctgtgaatgacagagagcaaagctttctttccaaaaaa
agaaaactggactctagctgttcagaatctgagattgaactcgtgcacactggcagagat
gatatgcttgagcagcaggagccaccttgtgacaatgaaagtgaatcacctctaattcat
ccaaggaatttgaatactgcagctgtgagaaggcttggaactagaatagctgttgtggat
aatcaccagctaaaaatggaggttgatactctggtgcacagtgccagctcagatgaagat
aatgtttctcagcctcagcattcaagcaaagcagaactgaccagtggaacaaacaaagaa
aaagaaagatccatccagaagcagaaggaagaagatctggtggaagttggacagacggag
cctgcagaaatgggcagtgcagaatgcaaaaggaagagtctgtctgtgaaggctgttgcc
tgtggcagattggatgtgctgaatgataaatgcgttgtgaagccatccacaccacagaaa
gctaactgcaaagaggaagctcacagacagtcaaaacaaggcatattttgtgtggatgca
gacggtgacaggacgtttctgaagaatgctaatgatgaaaatatctatgtactagatgcc
acaaaagaaggaaatgtgggtcgttttcttaatcacagctgctgccccaatctctttgca
cagagtgtgtttgtggagactcacaacagaagtttcccatgggttgctttcttcacaaac
aggcatgtgaaagctggaactgaactcacgtgggattatggatatgaagttggaagtatg
ccagagacagagatttcctgttggtgtggagttcagaaatgcaggaagaaaaccctggga
ctgcagcctccaacttcagcatcttgccaaattcctagggcacccagagacacctcatcc
aactgggaggaccagggcctatgcatctgcagcgatttcagagctcagggctgtcggcgg
cgacgtctcagacatttggtgcatctcacctcatgggagtgggaaactgaagatttctgc
tgtggacttgaagggaaaaccacaaatcttcctgttccaggtgctctccagacgatggcc
aaaatggtgagaaggacgtgtgccttctgttcagaaggggaggctgcttctataatgtac
gttgccaaagagcaaaatattgcagctcatcagagttgtttgttattttcctctggattt
gtggaatctgaagagtataacccagaaaatctagatttaaggtttgatgtggaatccgtg
ttgaatgaattcaaaagaggaaagcgactggtgtgcaatttctgtcgcaagaaaggagcc
acagtgggatgtgaggagagagcctgccgcaggagctaccactacttctgtgccttgtgt
gatgatgcagccacagaaacagatgaagtaaatggagtctaccgagtgttctgctcaaaa
catgacccaggcaacaggaccaatcactatgatgcagctaataagaggaaaagacatgca
tcgaaatcttccaccaccacggaacaaatgagggcagaagagacggcagaagaaaaccga
ttacggatattaagaaggaaaagcagcagacacaaagtccgaatcgactttctcaggaaa
tgcaaacaagcagggcttctggatgacatatttgaagaaatgttggacacccttcacttg
gcacaggaaaagctgatggatgacaacacttcagagacagagtatgaggagacggtaata
tcgctctttgactgcggactgtttgagaacatactgacaaatattcattcagggactgaa
gaaaaaattcaagaactgctggaaagcaggaaaagactggataaccagattgagctactg
caggagttaaaagaagtttccctgccctcccaagagagtactgccagtacatccagtaca
gtgtctgagtaa
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integrated database retrieval system
