Lagopus muta (rock ptarmigan): 125701935
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Entry
125701935 CDS
T09141
Symbol
PUS1
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmut03016
]
125701935 (PUS1)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
125701935 (PUS1)
Transfer RNA biogenesis [BR:
lmut03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125701935 (PUS1)
Prokaryotic type
125701935 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
WC-rich
Motif
Other DBs
NCBI-GeneID:
125701935
NCBI-ProteinID:
XP_048820516
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All DBs
Position
17:10049528..10053742
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AA seq
409 aa
AA seq
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MLALRWGLRAASGGFRPRNELVAMAKRPSGAGEGPEENGQQGKRLKGTADEGDAEEQSKR
TPKRKIVLLMAYSGKGYHGMQRNLGSSQFKTIEDDLVSALVQSGCIPENHGEDMKKMSFQ
RCARTDKGVSAAGQIVSLKVRLIDDILEKINNHLPSHIRILGLKRVTGGFNSKNKCDART
YAYMLPTFAFAHKDHDVQEEAYRLSRETLEKVNSLLACYKGTHNFHNFTSQKGPKDPSAR
RYIMEMYCGEPFVRDNIEFAVIKVKGQSFMMHQIRKMIGLVIAIVKGYAPESVIERSWGE
EKVDVPKAPGLGLVLERVHFEKYNRRFGNDGLHEPLEWKEEEEKIAVFKEQYIYPTIINT
EREEKSMMSWLSTLSIHDFNSSAAEMEANKKNSKSSDVEGSDGCGGDSD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgctgcgctgggggctgcgcgctgcgagcggagggttccgaccgcggaacgag
ctggtcgccatggcgaagaggccgagcggggccggcgagggaccggaggagaacgggcag
cagggcaagagactgaagggaaccgcggatgaaggggatgcggaggagcagagtaaaagg
acgcccaaaaggaagattgtgttgttgatggcgtactcggggaaaggctaccacggcatg
cagagaaatctgggctcttcgcagttcaagaccatcgaagatgatttggtgtctgccctc
gtgcagtctggctgcatcccagaaaaccatggtgaagacatgaagaagatgtcgttccag
cgctgtgctcggacagataagggtgtgtctgcagctggacagattgtgtcgctaaaggtc
aggctaatagatgacatcttagaaaagatcaataaccatcttccttctcatatcagaatt
ctggggctgaagagagtcactgggggattcaactccaagaacaaatgcgatgccagaacc
tacgcctacatgctgccgacgtttgcctttgcccataaagaccacgatgtgcaagaagag
gcgtatcgactcagcagagagacccttgagaaggtcaacagcctgcttgcttgctataaa
ggaacacacaacttccacaacttcacttctcagaagggacccaaggaccccagcgccagg
agatacatcatggagatgtactgcggggagcccttcgtgcgggacaacatagaattcgca
gtgatcaaagtgaaagggcagagcttcatgatgcaccagataaggaaaatgatcggactg
gtgatagctattgtgaaaggttatgctcctgagtctgttatagagcgcagctggggagag
gagaaagtggatgtgcccaaagctccggggcttggcctggtcttggaaagagtgcacttt
gaaaagtacaacagacgatttgggaacgatgggctgcacgagccgctggagtggaaggag
gaggaggagaagatcgctgttttcaaagagcagtatatctatcctaccattattaacaca
gaaagggaggagaagtccatgatgagctggctgagcaccctctccattcatgacttcaac
tcttctgctgctgagatggaagccaacaagaaaaattcaaagagcagcgatgttgaaggc
agcgatggttgtggcggtgattctgactga
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