Lagopus muta (rock ptarmigan): 125701942
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Entry
125701942 CDS
T09141
Symbol
CLDN5
Name
(RefSeq) claudin-5
KO
K06087
claudin
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03272
Virion - Hepatitis viruses
lmut04382
Cornified envelope formation
lmut04514
Cell adhesion molecule (CAM) interaction
lmut04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
125701942 (CLDN5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125701942 (CLDN5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125701942 (CLDN5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125701942 (CLDN5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmut03037
]
125701942 (CLDN5)
04147 Exosome [BR:
lmut04147
]
125701942 (CLDN5)
Cilium and associated proteins [BR:
lmut03037
]
Other cilia and associated proteins
Stereociliary proteins
125701942 (CLDN5)
Exosome [BR:
lmut04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
125701942 (CLDN5)
Exosomal proteins of colorectal cancer cells
125701942 (CLDN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
T4SS_CagC
MFS_MOT1
Motif
Other DBs
NCBI-GeneID:
125701942
NCBI-ProteinID:
XP_048820530
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All DBs
Position
17:11968556..11972109
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AA seq
216 aa
AA seq
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MTSAAVEILGLGLGILGWVGVILACGLPMWQVSAFIDVNIVVAQTIWEGLWMNCVVQSTG
QMQCKVYDSILALRPEVQAGRALTVIVALLGLVALMVTVVGAQCTNCIRPGKMKSRIVIA
GGTIYIVCGVLVLVPLCWFANIVISDFYDPSVPPSQKREMGAALYIGWAATALLLFGGCL
ICCCSCSQRDETSFPVKYSAPRRPTSNGEYDKKNYV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgacttcggcggcggtggagattctggggctcggactgggcatcctgggctgggtgggg
gtgatcctggcctgtgggctgcccatgtggcaggtgtcagccttcatcgacgtgaacatc
gtggtggcgcagaccatctgggaagggctgtggatgaactgcgtggtgcagagcacgggg
cagatgcagtgcaaggtgtacgattccatcctggcgctgcggcccgaggtgcaggcgggc
cgggcgctcacggtcatcgtggcgctgctggggctggtggcgctcatggtaaccgtggtg
ggtgcgcagtgcacaaactgcatccggcccggcaagatgaagtcccgcatcgtgatcgcc
ggagggaccatctacatcgtctgcggggtcctggtcctcgtcccgctctgctggttcgcc
aacatcgtcatcagcgacttctacgacccctccgtgccgccgtcccagaagcgggagatg
ggggccgcgctgtacatcggctgggcggccacggccctgctgctgttcgggggctgcctc
atctgctgctgctcctgctcgcagcgcgacgagacctccttccccgtcaagtactcggcg
ccgcggaggcccacttccaacggcgagtacgacaagaagaactacgtctga
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