Lagopus muta (rock ptarmigan): 125702103
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Entry
125702103 CDS
T09141
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04020
Calcium signaling pathway
lmut04080
Neuroactive ligand-receptor interaction
lmut04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125702103 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125702103 (GRIN2C)
04082 Neuroactive ligand signaling
125702103 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125702103 (GRIN2C)
Ion channels [BR:
lmut04040
]
Ligand-gated channels
Glutamate (ionotropic)
125702103 (GRIN2C)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
125702103
NCBI-ProteinID:
XP_048820951
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All DBs
Position
18:complement(10431540..10448740)
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AA seq
1380 aa
AA seq
DB search
MWHWETAPCTPKGAELEGTGLRSSPPHIQPPREESPPFAGVTQCWGGAWGSVPKWMGVKG
CVHPRRDTAVDMGRAPAHTLLLSLVLGCSAAFTDVLLPGPAEPVVNVAVVFGGTSYPLHI
RSRLSPQSFLDMPLEIHPITVVVNNTNPSTLLTHICDVLASHKIHGIVFEDNVGTEAVAQ
ILDFISSQTQVPIISISGGSAVVLSPKEPSSAFLQLGVSIEQQIQVIFKVLEEYDWSSFA
VITSLYPGYNIFLELIRSFTDASYFGWELQDVLTFEMSQERSSSRTQRLLRQLDAQVLLV
YCSRDEAEFLFEMAGQAGLVGPGYIWIVPSLTVGNMELPPTSFPVGLISVVTESWKLSLR
QKVRDGVAIIAMGAASFFRAHGFLPDVGRDCRAPAAAANASFYRHLLNVTWEHRDFSFNE
GGYLVRPTMVVISLNQHRLWEMVGKWEHGIIHMKYPVWPRYGSFLQPVVDNRHLTVATLE
ERPFVIVENTDPSTGVCVRNTVPCRKQTNASARTLTHFSRRGLSSDGLADPYTKLCCKGF
CIDILKKLAKTVKFSYDLYLVTNGKHGKIVRGVWNGMIGEVYYKRADMAIGSLTINEERS
EIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYF
SPVGYNQNLTSGKRPGGPTFTIGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAV
IFLASYTANLAAFMIQEQYIDTVSGLSDRKFQRPQEQYPPFRFGTVPNGSTERNIRSNYP
DMHTHMVKYNQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATT
GYGIALQKDSRWKRAIDLALLQFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAG
VFYMLLVAMGLSLLVFAWEHLVYWKLRHSVPKSHKFDFLLAISRGIYSCFSGVQTLGSPG
RAPTPDVTASSAQANVLKMLQAAKDMVSTASVGGSLEHATRTIEDWSSRSEHLQTTFSLR
TPQLVVQNSTGTHRGPSCGPPHPERLHRVYVPKGPPRGLPLPIPVDSREERWRGPSERTA
RVLHPVKLQGGGAADRALPGPFPHLPAKAAPDGDFEEHALMGNHIGAPTPPGKLPPPDIY
REHRRADRPPTAPLLCGDGAGTASRPLPASEARREAGNASLPLACARGSFPKAARTCRAA
AEREQPSRRASADRASRERGEKRRGAGLRRCGARPPAARGDVPDLFPEAEAAHGCGPRCP
EAAGRLAGPGRAPRSPLARLPSYREACRQKPRGTACAPYACADSFAHPPLCLGRSSREHP
EVPGGSRGPGRWDGAHRDWGRRGEPGWPRAVGAEWLAARGVTSPCAGGSWRRVSSLESEV
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgtggcactgggagacagcaccctgtactcccaaaggggctgagctggagggcacaggc
ctacggtcatccccaccccacatccagcctccaagggaggagagtccccctttcgctggg
gtcacccagtgctggggtggtgcgtggggcagtgtccccaaatggatgggtgtgaagggc
tgtgtccatcctcgcagggacacggcggtggacatgggcagagcgccggcgcacactctg
ctgctgtcgttggtgctgggctgctcggctgccttcaccgatgtgctgctgcccggccct
gcagagccagtggtcaacgtggccgtggtgtttgggggcacgtcctacccgctgcacatc
cgctcccgcctgagtccccagagcttcctggacatgcccctggagatccaccccatcacc
gttgttgtcaacaacaccaaccccagcaccctcctcacccacatctgcgacgtgctggcc
agccacaagatccacggcattgtcttcgaggacaacgttggcacggaagcagtggcccag
atccttgacttcatctcctctcagacccaggtccccatcatcagcatcagcgggggctct
gcggtggtcctcagccccaaggagcccagctcagccttcctgcagctgggcgtctccatt
gagcagcagatccaggtgatcttcaaggtgctggaggaatacgactggagctcctttgcc
gtcatcaccagcctctacccgggctacaacatcttcctggagctcattcgctccttcact
gatgccagctacttcggctgggagctgcaggacgtgctcaccttcgagatgagccaggag
cggagcagctccaggacgcagcggctcctgcggcagcttgatgcccaggtgctcctggtc
tactgctcacgggacgaggctgagttcctctttgagatggctggacaagccgggctggtg
gggccgggctacatctggatcgtgcccagcctcacggtgggcaacatggagctgccgccc
acctccttccccgtcggcctcatcagcgtggtgacagagagctggaagctgagtctgcgg
cagaaggtgcgggacggggtggccatcattgccatgggggcagccagcttcttccgagcc
cacggcttcctcccggatgtgggacgggactgtcgggcgcccgctgctgctgccaacgcc
agcttctaccggcacctcctcaacgtgacgtgggagcacagggacttctccttcaacgag
ggcggttacctggtcaggcccaccatggtggtgatctcgctcaaccaacaccggctctgg
gagatggtggggaagtgggagcacggcatcatccacatgaagtacccggtgtggccccgc
tacggctccttcctgcagcccgtggtggacaaccggcacctgacggtggccacgctggag
gagcggcccttcgtcatcgtggagaacaccgaccccagcaccggcgtctgcgtgcgcaac
accgtgccctgccgcaaacagaccaatgcctcggccagaaccctgacccatttttctcgg
cgcggtctcagcagtgatggcctcgcagacccctacaccaagctgtgctgcaaaggcttc
tgcatcgacatcctgaagaagttggccaagacggtgaagttctcctacgacctctacctg
gtgaccaatggcaagcacggcaagatcgtgcgcggggtgtggaacggcatgattggtgag
gtgtattacaagcgtgcagacatggccatcggatccctcaccatcaatgaggagcgctcc
gagatcgtggacttctctgtgcccttcgtggagactggaatcagtgtgatggtggccagg
agcaacggcactgtctcaccctctgccttcctggagccctacagcccagccgtgtgggtg
atgatgtttgtgatgtgtctgaccgtggtggccgtcactgtctttgtgttcgagtatttc
agccctgttggttacaaccagaacctcaccagtggcaaaaggccgggcggtcccaccttc
accatcggcaagtcggtgtggctgctgtgggctctggtcttcaacaattccgtgcccatc
gagaaccccaagggcaccaccagcaagatcatggtgctcatctgggccttcttcgccgtc
atcttcctcgccagctacaccgccaacctggcggcctttatgatccaggagcagtacatc
gacaccgtgtcagggctgagcgacaggaagttccagaggccacaggagcaataccccccg
ttccgcttcggcaccgtccccaacggcagcaccgagaggaacatccgcagcaactacccc
gacatgcacacccacatggtgaagtacaaccagcgctctgtggaggatgccctcaccagc
ctcaagatggggaagctggatgccttcatctacgatgcggcggtgctcaactacatggcg
ggcaaagacgagggctgcaagctggtgaccattggcagcgggaaggtgtttgccaccacg
ggctacggcatcgccctgcagaaggactcacgctggaagcgggccattgacctggccctg
ctgcaattcctgggagatggtgagacccaaaagctggagacggtgtggctgtcggggatc
tgtcagaacgagaagaacgaagtgatgagcagcaagctggatattgacaacatggctgga
gtcttctacatgctgctggtggccatggggctcagcctgctggtcttcgcctgggagcac
ctcgtctactggaagctgcggcacagcgttcccaagtcccacaagttcgacttcctcctg
gccatcagcaggggcatttacagctgcttcagcggggtgcagaccctgggcagccccggg
cgggcgcccacgcccgacgtgacggcgagctcagcccaagccaacgtgctgaagatgctg
caggcggccaaggacatggtgtcgacggccagcgtgggcggctcgctggagcacgccacg
cgaaccatcgaggactggagcagccgcagcgagcacctccagaccaccttctcgctcagg
acgccgcagctcgtggtgcagaacagcaccggcacgcatcggggtccctcctgcgggccc
ccgcaccccgagaggctgcacagagtctacgtgcccaaagggccgccccgggggctgcct
ctgcccatccccgtggactcccgggaggagagatggagagggccgagcgagcgcaccgcc
cgcgtccttcaccccgtgaagcttcagggcggcggtgcggcggacagagccctcccgggg
cccttcccacacctcccggcgaaggcggcgccggacggggatttcgaggagcacgcgctg
atggggaaccatatcggcgctccgacgcctcccgggaagctccctccgccggacatctac
cgggagcacaggcgggcggaccggccgcccaccgccccgctgctctgtggcgacggggcg
gggacggcgtctcgtccgctcccggcgtcggaggcgagaagggaggcggggaacgcgtcc
cttcccctcgcctgcgcccgcggctccttccccaaagccgccaggacttgcagagccgcg
gcagagcgggagcagccgagccggcgggcgagcgcggaccgagcgtcgcgggagcgggga
gagaagcgtcgcggtgcggggctgcggcggtgcggggcgcgcccacccgctgcccgcggc
gacgtccccgacctcttccccgaagccgaggccgcccacggctgcggtccgcgctgcccc
gaggccgccgggcggctggccgggccgggccgggcgccgcgctcccctctggcccggctg
ccgtcctaccgagaagcgtgccggcagaagccccgcggcaccgcgtgcgcgccctacgcc
tgcgcggactccttcgcccacccgcccctctgcctgggccgttcgtcccgcgagcacccc
gaggtgccggggggcagccgggggccggggcgctgggacggagcccacagagactggggg
cggcggggggagccgggctggccgcgcgcggtgggcgcggagtggttggcggcccgcggg
gtgacgagtccctgtgccggcgggtcctggcggcgggtctccagcctggagtccgaggtt
tga
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