Lagopus muta (rock ptarmigan): 125702105
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Entry
125702105 CDS
T09141
Symbol
SOX9
Name
(RefSeq) transcription factor SOX-9
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125702105 (SOX9)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125702105 (SOX9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125702105
NCBI-ProteinID:
XP_048820962
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All DBs
Position
18:complement(6242663..6246212)
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AA seq
495 aa
AA seq
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MNLLDPFMKMTEEQDKCISDAPSPTMSDDSAGSPCPSGSGSDTENTRPQENTFPKGDPDL
KKESDEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQSEQEEGSEQTHISPNAIFKALQADSPQSSSSISEVHSPGEHSGQSQGPPTPPTT
PKTDAQQPGKQDLKREGRPLAEGGRQPPHIDFRDVDIGELSSDVISNIETFDVNEFDQYL
PPNGHPGVPATHGQVTTYSGTYGISSSAGSPAGAGHAWMAKQQPQPPQPPAQPPAQHALP
ALSGEQGPAQQRPHIKTEQLSPSHYSEQQQHSPQQQQQQQQQQLGYGSFNLQHYGSSYPP
ITRSQYDYTEHQNSGSYYSHAAGQSGGLYSTFTYMNPTQRPMYTPIADTSGVPSIPQTHS
PQHWEQPVYTQLTRP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctagaccccttcatgaaaatgacagaagaacaggacaaatgcatctccgac
gcccccagccccaccatgtcggatgactccgccgggtctccctgcccctccggatccggc
tcggacacggagaacacccgaccccaagagaacacctttcccaaaggcgacccggacctg
aagaaggagagcgacgaggacaaattccccgtatgcatccgcgaggctgtgagccaggtg
ctcaagggctacgattggaccctggtgcccatgcccgtgcgagtgaacggatccagcaag
aacaaaccccacgtgaagcgtcccatgaacgcattcatggtatgggcccaggcggctcga
aggaagctggctgaccagtaccctcatctgcacaacgccgagctcagcaagacgctgggc
aaactgtggaggctgttgaacgagagcgagaagcgtccctttgtggaggaggccgagcgg
ctgcgggtacagcacaagaaggaccaccctgactacaagtaccaaccacgcaggaggaag
tcagtgaagaacgggcagtcggagcaggaggagggctctgagcagacccacatctccccc
aatgccatcttcaaggcgctgcaggcggactccccgcagtcatcctccagcatcagcgag
gtgcactcccccggggagcactcggggcagtcacagggcccccccacaccccctaccacc
cccaagacggacgctcagcagccaggcaagcaggacctgaaacgcgagggccgccctttg
gcggaaggcggccgccaacctccccacatcgattttcgagacgtggacatcggcgagctc
agcagcgacgtcatctctaacatcgaaaccttcgacgtcaatgagttcgaccaatacctg
ccccccaacggccacccgggggtcccggccacccacggccaagtcaccacctacagcggt
acctacggcatcagcagctcggccggctctccggcgggcgcggggcacgcctggatggcc
aagcaacagccgcaacccccgcagcccccggcgcagcccccagcgcagcacgcactgcca
gcactgagcggtgagcagggcccggcacagcagcggccgcacatcaaaacagagcagctg
agccccagccactacagcgagcagcagcagcactccccgcagcaacagcagcagcagcaa
cagcagcagctgggctacggctccttcaacctgcagcactacggctcctcatatcccccc
atcacccgctcgcagtacgattacaccgagcaccagaactccggctcctactacagccac
gccgccgggcagagcggagggctctactccaccttcacctacatgaaccccacgcagcgc
cccatgtacacccccatcgcagacacgtcgggggtgccctccatcccgcagacccacagc
ccgcagcactgggaacagcccgtctacacgcagctcacccggccttaa
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